Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1895 |
Symbol | |
ID | 6110846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 2123878 |
End bp | 2124711 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641621690 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001748767 |
Protein GI | 170721079 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACAC CCCTGCGCGA ACAGACCCAC CTTTGGCAGG CGCCCGCGCT GGGCGATGTC GAGATGCTGC ATGCGCGCTA CATTCAGCAA CGCTTCGCCC CACATGTTCA CGAGGGTTAC GTGTTCACCG TGATCGAGTC GGGTGCCCAG CGCTTCTGGC ACCGCGGCAG CGAGCACCTG GCACCCGTGG GCAGCATGGT GCTGATCAAC CCGGACGAAC TGCATACCGG CGCTACAGCC CATGAGGCTG GCTGGCGCTA CCGCGGGTTT TATCCGGAGC ATGAACGGGT GACCGGCGTG CTCGACGAGC TGGAACTGGG CCGCCACGGC ATGCCCTGCT TCAAGGACAG CGTGATCCAG GACCCGGCCC TGGCCATCGC CTTCAGCAAG CTGCATCGGC TGTCCGAAGC CAGCGCCAGT GCCCTGCAGC AACAGACCGC CTGGCGCCAG GCGGTTCTGG CCTTGGTACA ACGACACGGC CAATGCGCTG AACCCGCGCC CCCTGGCCAC GAACCACTGG CCGTAGCCCG CGCCCGCGAG CTGCTGGAGA GCCAACTGGC AGAACCGCCT TCGCTCGAAG CACTGGCAGG CGCGGTTAAT CTATCGCCGT TCCATTTCGC CCGGGTGTTC CGCCAGGCCA CCGGCCTGCC GCCGCATGCC TGGCTGAAGC AACGGCGCCT GGCCCGTGCC CGGGAAATGC TCAAGAGCGG CGTGACTGCA ACCGGCGTGG CTTTCAACCT GGGCTTCGCT GACCAGAGCC ACCTCAGCCG GCAATTCAAA CAGGCCTATG GCGTGACCCC GGGCGCCTAT CGCACCGCCT GCCTGCACGG GTAA
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Protein sequence | MSTPLREQTH LWQAPALGDV EMLHARYIQQ RFAPHVHEGY VFTVIESGAQ RFWHRGSEHL APVGSMVLIN PDELHTGATA HEAGWRYRGF YPEHERVTGV LDELELGRHG MPCFKDSVIQ DPALAIAFSK LHRLSEASAS ALQQQTAWRQ AVLALVQRHG QCAEPAPPGH EPLAVARARE LLESQLAEPP SLEALAGAVN LSPFHFARVF RQATGLPPHA WLKQRRLARA REMLKSGVTA TGVAFNLGFA DQSHLSRQFK QAYGVTPGAY RTACLHG
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