Gene PputW619_1870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_1870 
Symbol 
ID6110821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp2089965 
End bp2090462 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content63% 
IMG OID641621665 
ProductNADH dehydrogenase subunit E 
Protein accessionYP_001748742 
Protein GI170721054 
COG category[C] Energy production and conversion 
COG ID[COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit 
TIGRFAM ID[TIGR01958] NADH-quinone oxidoreductase, E subunit 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.142581 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGCA CGCTTATCCA GACAGACCGT TTCGCCCTGA GCGAAACCGA GCGCTCGGCC 
ATCGAGCACG AGATGCACCA CTACGAGGAC CCGCGCGCGG CGTCCATCGA AGCCTTGAAG
ATCGTTCAGA AGGAACGCGG CTGGGTGCCG GACGGCGCCA TCTACGCCAT CGGCGAAGTA
CTGGGCATCC CTGCCAGCGA CGTCGAGGGC GTGGCCACCT TCTACAGCCA GATTTTCCGC
CAGCCTGTCG GCCGCCACAT CATTCGTGTG TGCGACAGCA TGGTCTGCTA CATCGGCGGC
CACGAGTCGG TGGTCAGCCA GATCCAGAGC GAACTGGGCA TCGGCCTGGG CCAGACCACT
GCGGACGGGC GTTTCACCCT GCTGCCGGTA TGCTGCCTGG GCAACTGCGA CAAGGCCCCG
GCGCTGATGA TCGATGACGA TACCTTTGGC GACGTGCAGC CTGCTGGCGT TTCCAAGCTG
CTGGAGGGTT ACGTATGA
 
Protein sequence
MNSTLIQTDR FALSETERSA IEHEMHHYED PRAASIEALK IVQKERGWVP DGAIYAIGEV 
LGIPASDVEG VATFYSQIFR QPVGRHIIRV CDSMVCYIGG HESVVSQIQS ELGIGLGQTT
ADGRFTLLPV CCLGNCDKAP ALMIDDDTFG DVQPAGVSKL LEGYV