| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1861 |
|---|
| Symbol | |
|---|
| ID | 6110812 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 2078458 |
|---|
| End bp | 2079927 |
|---|
| Gene Length | 1470 bp |
|---|
| Protein Length | 489 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641621656 |
|---|
| Product | NADH dehydrogenase subunit N |
|---|
| Protein accession | YP_001748733 |
|---|
| Protein GI | 170721045 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1007] NADH:ubiquinone oxidoreductase subunit 2 (chain N) |
|---|
| TIGRFAM ID | [TIGR01770] proton-translocating NADH-quinone oxidoreductase, chain N |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.490828 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.0339146 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTCA CCACTCAACA CTTCATCGCA TTGGCGCCGA TGCTGATCAC CACCATCACC
ACGGTGGTGG TGATGCTGGC GATCGCCTGG AAGCGCAATC ACTCGCAGAC CTTCCTGTTG
TCCACCGTGG GCCTGAACCT GGCCCTGTTG TCGATTCTGC CGGCGCTGAA GGTTGCGCCG
CTGGCGGTCA CCTCGCTAAT CACCATCGAC AAGTTCGCCT GCCTGTACAT GGCCATCGTA
CTGGTGGCTA CGCTGGCCTG CGTCACACTG GCTCACGCCT ATCTCGGTGA AGGCTCCAAG
GGTTTCCCGG GCAACCGTGA AGAACTTTAC CTGCTGCTGT TGATGTCGGC TCTCGGTGGC
CTGGTGCTGG TCAGCGCCAA CCACTTGGCC GGCCTGTTCA TCGGCCTGGA GCTACTGTCG
GTACCGGTCT ACGGCCTGGT GGCGTACGCC TTCTTCAACA AACGTTCGCT GGAAGCCGGC
ATCAAGTACA TGGTGCTGTC GGCCGCAGGC TCGGCCTTCC TGCTGTTCGG CATGGCCCTG
CTGTATGCCG ATGCCGGCAG CCTGAGCTTC GACCAGATCG GTAAAAGCCT GGCCGCCACC
AGCATGCCAA GCCTGGTGGC CCAACTGGGC CTGGGCATGA TGCTGGTCGG CCTGGCCTTC
AAACTGTCGC TGGTACCCTT CCACTTGTGG ACCCCGGACG TGTACGAAGG CGCCCCGGCA
CCGGTCGCCG CGTTTTTGGC CACCGCGAGC AAGGTCGCAG TGTTCGCCGT GGTCGTACGC
CTGTTCATGC TCTCCCCTGC TGCCAGCAGC GGCGTGCTGA GTACTGTTCT GGCGGTGATA
GCGGTCGCAT CGATCCTAGT GGGTAACCTG CTGGCGCTGA CCCAGAGCAA CCTCAAGCGT
CTGCTCGGTT ACTCGTCCAT CGCCCACTTC GGTTACCTGC TAATCGCCCT GATCGCCAGC
AAGGGCCTGG CCATGGAAGC GATGGGCGTG TACCTGGTCA CCTACGTGAT CACCAGCCTG
GGTGCGTTCG GTGTCATCAC CCTGATGTCC TCGCCTTACG GCGGCCGTGA TGCCGATGCG
CTGTACGAAT ACCGCGGCCT GTTCTGGCGC CGCCCATACC TGACTGCAGT ACTGACCGTG
ATGATGCTGT CGCTGGCCGG TATCCCGCTG ACCGCTGGCT TCATCGGCAA GTTCTACATC
ATCGCCACTG GCGTCGAGTC GCACCTGTGG TGGCTGGTCG GTGCCCTGGT GGTCGGTAGC
GCCATCGGCG TTTACTACTA CCTGCGCGTG ATGGTCACCC TGTACCTGGT CGAGCCGAAC
CTGCGCCGCC ACGATGCGCC GCTGAAGTGG GAACAGCGTA CTGGCGGCGT GATGCTGCTG
GCGATCGCCA TTCTCGCTTT CGTACTGGGT GTATACCCGC AGCCATTGCT GGAAATGGTC
CAGCAGGCTG GCCTGCAACT GATCGGCTGA
|
|---|
| Protein sequence | MEFTTQHFIA LAPMLITTIT TVVVMLAIAW KRNHSQTFLL STVGLNLALL SILPALKVAP
LAVTSLITID KFACLYMAIV LVATLACVTL AHAYLGEGSK GFPGNREELY LLLLMSALGG
LVLVSANHLA GLFIGLELLS VPVYGLVAYA FFNKRSLEAG IKYMVLSAAG SAFLLFGMAL
LYADAGSLSF DQIGKSLAAT SMPSLVAQLG LGMMLVGLAF KLSLVPFHLW TPDVYEGAPA
PVAAFLATAS KVAVFAVVVR LFMLSPAASS GVLSTVLAVI AVASILVGNL LALTQSNLKR
LLGYSSIAHF GYLLIALIAS KGLAMEAMGV YLVTYVITSL GAFGVITLMS SPYGGRDADA
LYEYRGLFWR RPYLTAVLTV MMLSLAGIPL TAGFIGKFYI IATGVESHLW WLVGALVVGS
AIGVYYYLRV MVTLYLVEPN LRRHDAPLKW EQRTGGVMLL AIAILAFVLG VYPQPLLEMV
QQAGLQLIG
|
|---|
| |