| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1857 |
|---|
| Symbol | |
|---|
| ID | 6110808 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 2076905 |
|---|
| End bp | 2077153 |
|---|
| Gene Length | 249 bp |
|---|
| Protein Length | 82 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641621652 |
|---|
| Product | LuxR family transcriptional regulator |
|---|
| Protein accession | YP_001748729 |
|---|
| Protein GI | 170721041 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00288103 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.0218384 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCCA ACACGCAACA GATCGAAGAT AGCCAAGCGG ATACGCCTAT TCGCCTGACC
CCGAGAGAGC AGCAGGTATT GCTGTGGTGC GCCTATGGCA AGAGTTCGTG GGAAATCGGT
CAGATCCTGC AGTGCCAGGA ATCGACGGTT AATTTCCATG TGGGCAACAT CCTGCGCAAA
TTCGATGTAT CAACGCGCGT CGCCGCCGTG ATCAAGGCCA TTCGCTACGG CATGCTCGCA
GAGCAGTGA
|
|---|
| Protein sequence | MKANTQQIED SQADTPIRLT PREQQVLLWC AYGKSSWEIG QILQCQESTV NFHVGNILRK
FDVSTRVAAV IKAIRYGMLA EQ
|
|---|
| |