| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1849 |
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| Symbol | |
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| ID | 6110800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 2067708 |
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| End bp | 2068817 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641621644 |
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| Product | agmatine deiminase |
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| Protein accession | YP_001748721 |
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| Protein GI | 170721033 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2957] Peptidylarginine deiminase and related enzymes |
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| TIGRFAM ID | [TIGR03380] agmatine deiminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.552976 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00228426 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCACGTT CGCTCACCAC CACGCCCAAG GGCGATGGTT TCCGCTTGCC TGGCGAATTC
GAACACAAGG CAGGCTGCTG GCTCGGTTGG CCCGAGCGGC CAGATGTGTG GCGCAATGGC
GGTAAGCCGG CGCAAAAGGT CTGGGTCGAA ATTGCCACCG CCATCGCGTC CAGCGAACCG
GTCACGGTTT GCGCGTCTGC TGCCCAGTAC GCCAATGCCC GGCGCTTGCT GCCAGCGCAG
GTGCGGGTGG TGGAAATGAC CTGCAATGAC ACTTGGTTCC GAGACAGCGG CGCGTGCTTC
GTGGTCAACG ACAGCAGCGG CGAAGTGCGC GGTGTGGACT TCGAATTCAA TGCCTACGGC
GGCCTGGACG GCGGCCTTTA TTACCCGTGG GACAAGGACG ACCAGATCGC CCAGAAAATC
CTCGAAATCG AAGGTTTGGA CCGCTATCGC GCGCCATTGA TTGCCGAACT CGGCGGCATC
CAGAGCGACG GCCAGGGCAG CCTCTTGACC ACCGAACAGT GCCTGCTCAA CCGTAACCGC
AATGCCCACC TGGGCAAGGA TGAAGTCACG CGCCGGCTTG AGGACTACCT GGGTGCCGAC
CAGGTGATCT GGCTGCCGCG CGGTTGCAAG TTCGACGAAA CCGATGGCCA CGTCGACGAC
CTGGCGTGTT TCGCGCGGCC CGGTGAAGTG GTGCTGCAAT GGACCGACAA CCGTGAAGAC
CCACAGTGGG AGATCTACCA GGAGGCTTAC GATATATTGC GCAGCACCCG CGATGCTCGC
GGGCGGGAAC TCAAAGTTCA CAAGCTGCCC CAGCCCGAGG TGCTGCAGTG GACGGCCGAG
GAAGCTGCCG GGCTGGATCA GGTCGAAGGC ACGCACGTGC GGGAGGCCGG CACCCGGATC
TGTGCCTCCT ACATCAACTA CTACGCCGGC AACACGGCCA TCGTCGTGCC GCTGTTCGGT
GACCGCAATG ACAGCGTAGC CCAGGCCACC CTGGCTGAAC TGTTCCCCGG CCACCGTATC
ATTGGCATCG ACAATTCGCG GGAAATCCTG CTCGGTGGCG GCAATGTCGC CTGCATCACC
ATGCCTCAAT ACGCCGGAGG CCGCCGCTGA
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| Protein sequence | MARSLTTTPK GDGFRLPGEF EHKAGCWLGW PERPDVWRNG GKPAQKVWVE IATAIASSEP
VTVCASAAQY ANARRLLPAQ VRVVEMTCND TWFRDSGACF VVNDSSGEVR GVDFEFNAYG
GLDGGLYYPW DKDDQIAQKI LEIEGLDRYR APLIAELGGI QSDGQGSLLT TEQCLLNRNR
NAHLGKDEVT RRLEDYLGAD QVIWLPRGCK FDETDGHVDD LACFARPGEV VLQWTDNRED
PQWEIYQEAY DILRSTRDAR GRELKVHKLP QPEVLQWTAE EAAGLDQVEG THVREAGTRI
CASYINYYAG NTAIVVPLFG DRNDSVAQAT LAELFPGHRI IGIDNSREIL LGGGNVACIT
MPQYAGGRR
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