| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1845 |
|---|
| Symbol | |
|---|
| ID | 6110796 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 2063393 |
|---|
| End bp | 2064748 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641621640 |
|---|
| Product | glutamine synthetase catalytic region |
|---|
| Protein accession | YP_001748717 |
|---|
| Protein GI | 170721029 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0174] Glutamine synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.561959 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.00870398 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACAACAA CAACGACAGG CTTTGCCGAT CTGCTCAGTG AAGTCCGCGC CTTCCGCGCC
CGTTACCCCG AAGTACGCCA CGTCGACCTG CTGAGCCTAG ACATCCCCGG GCATTTCTAC
GGCAAGCGCT ACCCCATCGA CATGCTGGAA AAGGTCGCCG CCGGCAGCCC GCTGAAACTG
CCGCAGAACT GCGTGCTGCT GGGCGTGCAA GGCGGGCTGT TCCCGATTGG CGACTACTGC
TTCAACGACG GCGACCCGGA CGCCCTGCGG CGCCTGGTGC CCGGCACACT CAAGCCGGTC
AGCTGGGAGC GCGAACCGCT GGGCCAGATG CTGATCAGCT CCGACGGCAC CGCCTCGCCC
ATCGAGTTCG AGCCCAGGGA GGTGCTCGCC CGCGTGCTGC AGCGCTTTGA ACGGCGCGGC
ATTCGCCCGG TGGTGGCGTT CGAGCTGGAG TTCTACCTGC TCGACCGGGC ACTCAAGCAG
GGGCTGCCGC AGTTCCCCCG CGACCCGTTC AGCGATGACC CCGACGACCA GCCCAACATG
CACATCGAAC GGCTGTCGCG GTTCAGCGAC GTGCTGCGCG ACATGGTCGA TACCGCCAAC
GCGCAAGGGG TCGACGCCAA CGTCATCACC GCCGAGCTGG GTCCTGGCCA GTTCGAGATC
AACTTCGGCC ACTGCGACGA CGGCCTGCGC GCCGCCGACT GGGCTGCCTT GTTCTGCCGC
AGTACGCGTG GCGTTGCGCT CAAGCACGGG CTGCGTGCCT CGTTCATGAG CAAACCTTAC
CTGCAAGCGC CGGGCAGTGG CATGCACGTA CACGTCAGCC TGTACGACAT GGCCGGCCAC
AACCTGCTGG CGGCCGACCA GCAGCGCCCG CTGCGCCATG CCGTGGCCGG TTGCCTGGCC
TTGCTGCCGC ACTGCATGCC GATATTCGCC GCCAACCACA ATGCCTTTCG CCGGTACGGT
GCCATGGTCA ATGCCGCCAG CCGCGCCAGC TGGGGCTTTG AAGACCGTGA TGCGTGCATC
CGCATCCCGG AATCGGATGC GCGCAACGTG CGTATCGAAC ACCGGCTGGC GGGTGCCGAT
GCCAATCCCT ACCTGGTGCT GGCAGCGATC TTGTGCGGGA TGGAGCATGG ACTGGATGCC
GCGCAAGAGC CGATCGCGCC GCTCAATGAA GATCGCGCCA GCGGGGTCGA CTTTCCCAAG
GAAATGCTTG GCGCAGTCGC AGCCATGCGT GGGCACCCGG CCGTGAATGA AGGGCTGGGG
GAAGAGTTCG TGATGGTGTA TTGCGAGAAC AAGCGCCAGG ACCATCTCGC GTTCATGCAG
GAGGTCAGTG CCCGGGAGTA CCGGTGGTTC CTTTGA
|
|---|
| Protein sequence | MTTTTTGFAD LLSEVRAFRA RYPEVRHVDL LSLDIPGHFY GKRYPIDMLE KVAAGSPLKL
PQNCVLLGVQ GGLFPIGDYC FNDGDPDALR RLVPGTLKPV SWEREPLGQM LISSDGTASP
IEFEPREVLA RVLQRFERRG IRPVVAFELE FYLLDRALKQ GLPQFPRDPF SDDPDDQPNM
HIERLSRFSD VLRDMVDTAN AQGVDANVIT AELGPGQFEI NFGHCDDGLR AADWAALFCR
STRGVALKHG LRASFMSKPY LQAPGSGMHV HVSLYDMAGH NLLAADQQRP LRHAVAGCLA
LLPHCMPIFA ANHNAFRRYG AMVNAASRAS WGFEDRDACI RIPESDARNV RIEHRLAGAD
ANPYLVLAAI LCGMEHGLDA AQEPIAPLNE DRASGVDFPK EMLGAVAAMR GHPAVNEGLG
EEFVMVYCEN KRQDHLAFMQ EVSAREYRWF L
|
|---|
| |