Gene PputW619_1827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_1827 
Symbol 
ID6110778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp2043223 
End bp2044152 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content67% 
IMG OID641621623 
Productanti-FecI sigma factor, FecR 
Protein accessionYP_001748700 
Protein GI170721012 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.321558 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.321003 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCCG CGCCAGAGCG GCTGCCTGAA GCCATCGTGC GTACGGCCAT CGAGTGGCAG 
ATGCGCTTGC GGGCCAGCCC GGGCAATGTC GAGGTGTTCA GCCAGTTCAA TGCCTGGCGG
CTTTGTGATA CACGGCATGA ACTGGCCTGG CAGCGCATGC AGCAGGTCAG CGGGCACTTT
CACAATGGGC ATCTGCCCGA TGCCACTTGC ACGGCCGCTG TGCTGCGCCA GGCCGACATC
GACCTGAGCC GCCGCCGCAC CCTCAAGCTG CTGGGCCTGG GCCTGACAGC GGGCGGCGCC
ACGCTGCTGA TCGGCACTGC GCCCCCCGCG TGGCGTAGTG ACGTCACCAC CGGTGTTGGC
GAACAGCGGC AGTTGCGCCT GAACGGCGAC ATCCAGTTGC AATTGAACAC GGACAGCGCC
GTTGACCTGC ATGGCAGGGA AATCCGCCTG CGCAGTGGCG AAATGTTGGT CGATGGCGCC
GACTGGCGCG TGCGCTGCCA GCAGGGCGTT TGCGACGGCC ACCAGGCGCG TGCCGTGCTG
CGCGAGCGCG ATGGTTACAG CGAGTTGCAC GTCGAGCGTG GTGAAGTGCT GGTAACTGCC
GCTGCCGGCC GGCAGCGGGT GCAGGCTGGC AGCGGCCTCG CCCTCTACCC CACGCGACTG
GCGTCTCTGG ACGCCGGCGT TCTTGATCCG TTCGCCTGGA GCCGCGGCCT GCTGATCGTC
AACGACATCC CCCTGGCCGA CTTCCTCGCC GAGGCAGCTC GCTACCGCCG TGGCTGGCTG
CGCTGCGACC CGGCAGTGGC CGACCTGCGC CTGTCGGGGG TGTTCCACCT CGACCAGCCG
GGGGCACTGC TGGACAACAT CGCCCACTTG CTGCCTGTAC GTATCGACCA ACGCACACGC
TGGTGGGTAC GTATTTCAAC CCAGGCATGA
 
Protein sequence
MTAAPERLPE AIVRTAIEWQ MRLRASPGNV EVFSQFNAWR LCDTRHELAW QRMQQVSGHF 
HNGHLPDATC TAAVLRQADI DLSRRRTLKL LGLGLTAGGA TLLIGTAPPA WRSDVTTGVG
EQRQLRLNGD IQLQLNTDSA VDLHGREIRL RSGEMLVDGA DWRVRCQQGV CDGHQARAVL
RERDGYSELH VERGEVLVTA AAGRQRVQAG SGLALYPTRL ASLDAGVLDP FAWSRGLLIV
NDIPLADFLA EAARYRRGWL RCDPAVADLR LSGVFHLDQP GALLDNIAHL LPVRIDQRTR
WWVRISTQA