| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1826 |
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| Symbol | |
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| ID | 6110777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 2040831 |
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| End bp | 2043170 |
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| Gene Length | 2340 bp |
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| Protein Length | 779 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641621622 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001748699 |
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| Protein GI | 170721011 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.605271 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.34402 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGCT TCATGCTGCC TGCCCGACCG CCCCGCTGCT CCCGAACCTT GTCACGTGCC
GTGTACCTTG CGTTGGCCCT GCACGCCGGT GGTGCGCTGG CCGCCACAGC GACCGCGCCG
AGCATCCCGG CAGGCCCGCT GGGGCAGGCG CTGAGTGCCT TCGCTGAACG TGCCGGGATC
ACCCTGTCCT TCTCGCCGGA GGCCGTGCGC GGCCTGAACA GTCCCGGGCT GGCCGGTGGT
GGCCCGCTGG AAGACGGGCT AAACCAACTG CTCAGTGGCA GTGGCCTGCA ACTGCACAAG
TCCAGCGCCG GTTATGTGGT GCTGCCCAGC CAGGGCGACG CCAGCTTGCA ACTGGAGCCG
ATCAGCATCG ACGCAACCGC CTCGCAAAGC GCCTTCGCGC CCGTCGAGGG CTACTTCGCC
AGCAACGCCA GCAGCGCCAC CAAGACCGAC CGGCCCATCC TGGAAACCGC GCAGAGCATC
AGCGTGGTCA CCGCCGAGCA GATCGCCGAC CGCAAGGTCG ACCGCGTCGA GGATGCCGTG
GCCTACACTG CCGGTGTACG GGTAGGAGCA TCAGGCCTGG ACCCACGTTT CGACATGATC
AGCATCCGTG GCTTCGAAAC CACCATGGGC GCGGACTTTC TCGATGGCCT GCGCCAACCC
GGCAGCGGCT GGTTGTCGCT ATACCAGACC GAAGCCTACA ACCTGGAGCG CATCGAAGTG
CTCAAAGGCC CGTCGTCGGT GATGTACGGG CAGATCAGCC CCGGCGGCAT GGTCAACCGG
GTCAGCAAAC GCCCTGGCCT GCAGGCAAAA AACGAAGTGC AGATCCAGTC GGGCAACTAC
AACCACCAAC AAGGGCAATT CGACCTGGGT GGCAAGCTGA ACGAGTCCGG CGACCTGCTA
TACCGCGTTG TGGGTGTGTA CCGCGATGCC GAAAACTATA TCGAGCAGTT GAACAACGAC
GTGCGCCTGA TCGCACCCTC GCTGACCTGG CAGATCGACC CAGACACCAG CCTGACCCTG
CTGGCGCAAT ACCAGGAACG CGAGACAGCC GCCTCACCGA TGCTCTACCA GCAGGGCGAG
CACCTGAGCA ATTTCTGGCA GGGTGACGAG TACTTCGACA AGCTGCAACA GCGCCAATGG
ACCTTTGGCT ACGAATTCGA GCACATCTTC AACGACACCT TCAGCCTCCA GCAGAACCTG
CGTTACGGCC AGGTCGATAC CACCAACCAG TACCTGCAAC CTTATCAGGA GCGCGAGGGG
CACATTCTCG ACCGCGATGC CATCGGTGTG TACGAAGACA TGTCGAGTGT CTCGGCCGAT
ACGCGCCTGG TCAGCCGTTT TGCGACCGGC ACCCTGCACC ACACCTTGCT GACCGGCGTG
GACTACGGCT GGATCGACAC CTCATTGCTG TATGCCAGCG GCCCGGCGCC GTCGATCGAC
CGCTTCGCGC CCGACTACCA CCAACCTGTC GCCAAACCGG GTACGCCGCT GGCGGACGAA
GATGGCCTGG AGCAACGCAC CGGCCTGTAC CTGCAGGACC AGATCGACCT CGACCGCTGG
CGGCTTTCGG CCGGCTTGCG CCGCGACTTC GTGCATGTAC GGCGCAGCGA CAACCTCAGC
GGCATCAACC GCAAGACCAG TGACTCAGCC ACCACTGGCT CGGTCGGCGC GCTCTACCTG
TTCGACAACG GCCTGGCACC CTACGCCAGC TACGCCACCT CGTTCCAGCC ACAGAGTGGC
AGCGGTGCCT ACAAACCCAC CGAAGGCGAA CAATACGAAG TGGGCTTGAA GTACCAGCCA
CCAGGCAGCG CAACGATGCT CACCGCCTCG CTGTACCACC TGACCCAGAA GAACGTGCTT
ACCCGCGACC TGGCCAACCC GATCAACAGT ATCGCCACTG GCGAGCAGGT CTCCAAGGGC
TTGGAACTGG AAGCCGTTTC CGACCTCAGC GACCGGCTGA AGATGACCGC CAGCTACAGC
TTCAACGACC CCGAAGTGAC TGAAAGCAAC GATGGCAATG AAGGCAAGCA GCCACTGGAC
GTTCCCCGCC ATCTTGCTTC TGTCTGGCTC GACTACCGCC TGCCGATGGG CGTAGGCGTC
TCTGGCGGTG CCCGCTACAC CGGCAGCAAC TACGGCGATG CACAGAACAC CGTGAAGAAT
GAAGGCTACA CACTGGTCGA TGCCGGCGTG CACTACGACT TCGGCGGCGG CCTGGATGGC
GTTCGCCTGG CGCTCAATGC GCGCAACCTG TTCGACAAAC GCTATATCAA CTGCCAGCAG
GGCTACTGCT ACCGGGGTGA AGCGCGCAGC GTGGTCACCA GTCTGAGTTA TCGCTGGTAA
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| Protein sequence | MDRFMLPARP PRCSRTLSRA VYLALALHAG GALAATATAP SIPAGPLGQA LSAFAERAGI
TLSFSPEAVR GLNSPGLAGG GPLEDGLNQL LSGSGLQLHK SSAGYVVLPS QGDASLQLEP
ISIDATASQS AFAPVEGYFA SNASSATKTD RPILETAQSI SVVTAEQIAD RKVDRVEDAV
AYTAGVRVGA SGLDPRFDMI SIRGFETTMG ADFLDGLRQP GSGWLSLYQT EAYNLERIEV
LKGPSSVMYG QISPGGMVNR VSKRPGLQAK NEVQIQSGNY NHQQGQFDLG GKLNESGDLL
YRVVGVYRDA ENYIEQLNND VRLIAPSLTW QIDPDTSLTL LAQYQERETA ASPMLYQQGE
HLSNFWQGDE YFDKLQQRQW TFGYEFEHIF NDTFSLQQNL RYGQVDTTNQ YLQPYQEREG
HILDRDAIGV YEDMSSVSAD TRLVSRFATG TLHHTLLTGV DYGWIDTSLL YASGPAPSID
RFAPDYHQPV AKPGTPLADE DGLEQRTGLY LQDQIDLDRW RLSAGLRRDF VHVRRSDNLS
GINRKTSDSA TTGSVGALYL FDNGLAPYAS YATSFQPQSG SGAYKPTEGE QYEVGLKYQP
PGSATMLTAS LYHLTQKNVL TRDLANPINS IATGEQVSKG LELEAVSDLS DRLKMTASYS
FNDPEVTESN DGNEGKQPLD VPRHLASVWL DYRLPMGVGV SGGARYTGSN YGDAQNTVKN
EGYTLVDAGV HYDFGGGLDG VRLALNARNL FDKRYINCQQ GYCYRGEARS VVTSLSYRW
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