Gene PputW619_1823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_1823 
Symbol 
ID6110774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp2036138 
End bp2037880 
Gene Length1743 bp 
Protein Length580 aa 
Translation table11 
GC content66% 
IMG OID641621619 
Productmalto-oligosyltrehalose trehalohydrolase 
Protein accessionYP_001748696 
Protein GI170721008 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0296] 1,4-alpha-glucan branching enzyme 
TIGRFAM ID[TIGR02402] malto-oligosyltrehalose trehalohydrolase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.597034 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.146874 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAGGC ATGGCGCACA CCTACTGGAC GCCACGTCGG CGCGCTTCGC CCTGTGGGCG 
CCGGATGCGC GCAACGTGAG CTTGGAACTG GAGCAGCAGC CCCCTGTCGA GTTGCTGCCC
GACGAAGATG GCTGGTACAC GGGGATTGCC CCGTGCAAGG CAGGCGATCG TTATAAGTAC
CGCATAGACG GCAAGCTTCT GGTGGCCGAC CCGGCCTCGC GCTATCAGCC GGACGGCGTG
CAGGGGCCGA GCCAGGTGGT TGATACCCAG GCTTACGCCT GGCAACACTC CTGGCTAGGC
CGCCCTTGGC ACGAAGCGGT GATTCAGGAA CTGCACGTCG GCGTGCTCGA GGGCTACCCT
GGTGTCGCCC GGCATCTGCC GCGCCTGGCA GAGCTTGGCA TCAGCGCCAT CGAGCTGATG
CCGCTGGGGC AGTTCCCTGG CGAGCGTAAC TGGGGCTACG ACGGCGTGCT GCCATACGCG
CCGCAGCACA GCTATGGCAG CCCTGAGCAA TTGTGCGCGC TGGTCGACAA CGCCCACGGC
GAGGGCCTGA TGGTAGTGGT GGATGTGGTC TACAACCACT TCGGGCCGGA CGGCAACTAC
CTGCACCAGT ACGCCAGCCC GTTTTTCCGA GAGGACCGGC AGACGCCCTG GGGCGCAGCC
ATCGACTTCC GACGGCCAGA GGTGCGCGAG TTCTTCATCC AGAACGCCCT GATGTGGCTG
TGCGACTACC GCTGCGACGG CCTGCGCCTG GATGCAGTGC ATGCCATCGA CCAGCCCGAC
TTCCTGGTCG AGCTGGCGCA ACGGGTACGC GCTGCGGTGG AACCTGGCCG GCAGGTGTGG
CTGATGCTGG AGAATGAACA CAACCAGGCG TTCTTGCTGG AACAGGGCTT TGATGCCCAG
TGGAACGACG ATGGTCACAA TGCCCTGCAC GTGCTGCTCA CGGGTGAAAC CGAAGGGTAC
TACGCCGACT ATCAGCAACA GCCAATCAAC CAGCTGGCCC GCTGCCTGTC CGAAGGGTTC
GTGTTCCAGG GCCAGGCCAA CCGCCATGGC CAGCCGCGCG GCGAACCAAG TGGCCACCTT
GAGCCCAGTT CGTTCGTACT GTTTCTACAA AACCACGACC AGATCGGCAA CCGCGCCCTG
GGCGAACGCC TGACCCGCCT GTGCCCGGTC CCTGCCCTGC GCGCCGCTAC CGGCCTGTTG
CTGCTGTCGC CGATGATCCC GCTGTTGTTC ATGGGGGACG AGGATGGCAG TTGCCGGCCG
TTTCTGTTCT TCACCGACTT CCATGACGAG CTGGCCGATG CCGTGCGCGA AGGTCGGCGT
GGCGAATTCG CCCACTTCAC CGCCTTTGCC GACCCCGAGC AGCGCGAGCG CATCCCCGAC
CCCAATGCCG AGCAGACATT CCAGGCCTCA CGGCCACAGC GTCAGGAAGT CATCGCCGGC
TGGCACGGCC TTTATCAGCA ACTGCTCGAA CTGCGCCGGC GCCATGTCAT ACCGCACCTG
CCAGGCAGCC GTGCGCTGGG CGCCGACGTG CTGGGCGACA AGGCGCTGAC CGCACGCTGG
CGCCTGGGCA ATGGCAACAC CCTGCGCATC GACCTGAACC TGGCCGCCAC GCCACAGCCG
GTCGAACTGC CCGCTGCCGA ACACCGCCTG TTCGACAGTA GCGACACCAC GCACCCCGAC
ACCGCACTGT CTGCGTACAG CTGCGTGGTC AGCCTGCTTG CACCTGGCCA GGAGCGCCCA
TGA
 
Protein sequence
MHRHGAHLLD ATSARFALWA PDARNVSLEL EQQPPVELLP DEDGWYTGIA PCKAGDRYKY 
RIDGKLLVAD PASRYQPDGV QGPSQVVDTQ AYAWQHSWLG RPWHEAVIQE LHVGVLEGYP
GVARHLPRLA ELGISAIELM PLGQFPGERN WGYDGVLPYA PQHSYGSPEQ LCALVDNAHG
EGLMVVVDVV YNHFGPDGNY LHQYASPFFR EDRQTPWGAA IDFRRPEVRE FFIQNALMWL
CDYRCDGLRL DAVHAIDQPD FLVELAQRVR AAVEPGRQVW LMLENEHNQA FLLEQGFDAQ
WNDDGHNALH VLLTGETEGY YADYQQQPIN QLARCLSEGF VFQGQANRHG QPRGEPSGHL
EPSSFVLFLQ NHDQIGNRAL GERLTRLCPV PALRAATGLL LLSPMIPLLF MGDEDGSCRP
FLFFTDFHDE LADAVREGRR GEFAHFTAFA DPEQRERIPD PNAEQTFQAS RPQRQEVIAG
WHGLYQQLLE LRRRHVIPHL PGSRALGADV LGDKALTARW RLGNGNTLRI DLNLAATPQP
VELPAAEHRL FDSSDTTHPD TALSAYSCVV SLLAPGQERP