Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1823 |
Symbol | |
ID | 6110774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 2036138 |
End bp | 2037880 |
Gene Length | 1743 bp |
Protein Length | 580 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641621619 |
Product | malto-oligosyltrehalose trehalohydrolase |
Protein accession | YP_001748696 |
Protein GI | 170721008 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
TIGRFAM ID | [TIGR02402] malto-oligosyltrehalose trehalohydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.597034 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.146874 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACAGGC ATGGCGCACA CCTACTGGAC GCCACGTCGG CGCGCTTCGC CCTGTGGGCG CCGGATGCGC GCAACGTGAG CTTGGAACTG GAGCAGCAGC CCCCTGTCGA GTTGCTGCCC GACGAAGATG GCTGGTACAC GGGGATTGCC CCGTGCAAGG CAGGCGATCG TTATAAGTAC CGCATAGACG GCAAGCTTCT GGTGGCCGAC CCGGCCTCGC GCTATCAGCC GGACGGCGTG CAGGGGCCGA GCCAGGTGGT TGATACCCAG GCTTACGCCT GGCAACACTC CTGGCTAGGC CGCCCTTGGC ACGAAGCGGT GATTCAGGAA CTGCACGTCG GCGTGCTCGA GGGCTACCCT GGTGTCGCCC GGCATCTGCC GCGCCTGGCA GAGCTTGGCA TCAGCGCCAT CGAGCTGATG CCGCTGGGGC AGTTCCCTGG CGAGCGTAAC TGGGGCTACG ACGGCGTGCT GCCATACGCG CCGCAGCACA GCTATGGCAG CCCTGAGCAA TTGTGCGCGC TGGTCGACAA CGCCCACGGC GAGGGCCTGA TGGTAGTGGT GGATGTGGTC TACAACCACT TCGGGCCGGA CGGCAACTAC CTGCACCAGT ACGCCAGCCC GTTTTTCCGA GAGGACCGGC AGACGCCCTG GGGCGCAGCC ATCGACTTCC GACGGCCAGA GGTGCGCGAG TTCTTCATCC AGAACGCCCT GATGTGGCTG TGCGACTACC GCTGCGACGG CCTGCGCCTG GATGCAGTGC ATGCCATCGA CCAGCCCGAC TTCCTGGTCG AGCTGGCGCA ACGGGTACGC GCTGCGGTGG AACCTGGCCG GCAGGTGTGG CTGATGCTGG AGAATGAACA CAACCAGGCG TTCTTGCTGG AACAGGGCTT TGATGCCCAG TGGAACGACG ATGGTCACAA TGCCCTGCAC GTGCTGCTCA CGGGTGAAAC CGAAGGGTAC TACGCCGACT ATCAGCAACA GCCAATCAAC CAGCTGGCCC GCTGCCTGTC CGAAGGGTTC GTGTTCCAGG GCCAGGCCAA CCGCCATGGC CAGCCGCGCG GCGAACCAAG TGGCCACCTT GAGCCCAGTT CGTTCGTACT GTTTCTACAA AACCACGACC AGATCGGCAA CCGCGCCCTG GGCGAACGCC TGACCCGCCT GTGCCCGGTC CCTGCCCTGC GCGCCGCTAC CGGCCTGTTG CTGCTGTCGC CGATGATCCC GCTGTTGTTC ATGGGGGACG AGGATGGCAG TTGCCGGCCG TTTCTGTTCT TCACCGACTT CCATGACGAG CTGGCCGATG CCGTGCGCGA AGGTCGGCGT GGCGAATTCG CCCACTTCAC CGCCTTTGCC GACCCCGAGC AGCGCGAGCG CATCCCCGAC CCCAATGCCG AGCAGACATT CCAGGCCTCA CGGCCACAGC GTCAGGAAGT CATCGCCGGC TGGCACGGCC TTTATCAGCA ACTGCTCGAA CTGCGCCGGC GCCATGTCAT ACCGCACCTG CCAGGCAGCC GTGCGCTGGG CGCCGACGTG CTGGGCGACA AGGCGCTGAC CGCACGCTGG CGCCTGGGCA ATGGCAACAC CCTGCGCATC GACCTGAACC TGGCCGCCAC GCCACAGCCG GTCGAACTGC CCGCTGCCGA ACACCGCCTG TTCGACAGTA GCGACACCAC GCACCCCGAC ACCGCACTGT CTGCGTACAG CTGCGTGGTC AGCCTGCTTG CACCTGGCCA GGAGCGCCCA TGA
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Protein sequence | MHRHGAHLLD ATSARFALWA PDARNVSLEL EQQPPVELLP DEDGWYTGIA PCKAGDRYKY RIDGKLLVAD PASRYQPDGV QGPSQVVDTQ AYAWQHSWLG RPWHEAVIQE LHVGVLEGYP GVARHLPRLA ELGISAIELM PLGQFPGERN WGYDGVLPYA PQHSYGSPEQ LCALVDNAHG EGLMVVVDVV YNHFGPDGNY LHQYASPFFR EDRQTPWGAA IDFRRPEVRE FFIQNALMWL CDYRCDGLRL DAVHAIDQPD FLVELAQRVR AAVEPGRQVW LMLENEHNQA FLLEQGFDAQ WNDDGHNALH VLLTGETEGY YADYQQQPIN QLARCLSEGF VFQGQANRHG QPRGEPSGHL EPSSFVLFLQ NHDQIGNRAL GERLTRLCPV PALRAATGLL LLSPMIPLLF MGDEDGSCRP FLFFTDFHDE LADAVREGRR GEFAHFTAFA DPEQRERIPD PNAEQTFQAS RPQRQEVIAG WHGLYQQLLE LRRRHVIPHL PGSRALGADV LGDKALTARW RLGNGNTLRI DLNLAATPQP VELPAAEHRL FDSSDTTHPD TALSAYSCVV SLLAPGQERP
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