Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1810 |
Symbol | |
ID | 6110761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 2013671 |
End bp | 2014486 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641621606 |
Product | gamma-carboxygeranoyl-CoA hydratase |
Protein accession | YP_001748683 |
Protein GI | 170720995 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.404881 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.217331 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGATT TCAGCACCCT CGAAGTGATC CGTGACCCGC GCGGCTTCGC CACCCTGTGG CTGAGCCGCG AGGACAAGAA CAACGCATTC AATGCACAGA TGATCCGCGA GCTGATCGTC GCCCTCGGGC AACTGGCCGA CGACGCCAGC CTGCGCTTCA TGCTGCTGCG CGGCCGTGGC CGCCATTTCA GCGCTGGCGC AGACCTGGCG TGGATGCAGC AATCGGCACA ACTGGACTTC AACACCAACC TGGATGACGC CCGTGAACTG GGCGAACTGA TGTACGCCCT GCATCGCCTG AAGGTACCCA CCCTGGCCGT GGTGCAGGGC GCGGCCTTTG GCGGCGCCTT GGGGTTGATC AGTTGCTGCG ACATGGCCAT CGGCGCCGAG GATGCGCAGC TGTGCCTGTC CGAAGTACGC ATCGGCCTGG CCCCGGCGGT GATCAGCCCG TTCGTGGTCA AGGCCATCGG TGAGCGTACC GCGCGCCGTT ATGCCCTGAC CGCCGAACGC TTCAGCGGCG TACGGGCCCG GGAACTGGGC CTGTTGGCAG AGGTGTACCC GGCCAGTGAG CTGGAAGTGC AGGTACAGGC CTGGGTAGAC AACCTCTTGC AGAACAGCCC GCAAGCACTG CGCGCTACCA AGGACCTGCT GCGCGAGGTC GATGACGGTG AACTCAGCCC TGCCCTGCGC CGCTACTGCG AAAACGCCAT TGCCCGTATC CGTGTCAGCG CCGAAGGTCA GGAGGGCCTG CGCGCCTTCC TGGAAAAACG TCGCCCCGCT TGGCAGACCG AGCCCAACAA GGAGCCGCGC CCATGA
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Protein sequence | MSDFSTLEVI RDPRGFATLW LSREDKNNAF NAQMIRELIV ALGQLADDAS LRFMLLRGRG RHFSAGADLA WMQQSAQLDF NTNLDDAREL GELMYALHRL KVPTLAVVQG AAFGGALGLI SCCDMAIGAE DAQLCLSEVR IGLAPAVISP FVVKAIGERT ARRYALTAER FSGVRARELG LLAEVYPASE LEVQVQAWVD NLLQNSPQAL RATKDLLREV DDGELSPALR RYCENAIARI RVSAEGQEGL RAFLEKRRPA WQTEPNKEPR P
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