Gene PputW619_1810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_1810 
Symbol 
ID6110761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp2013671 
End bp2014486 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content65% 
IMG OID641621606 
Productgamma-carboxygeranoyl-CoA hydratase 
Protein accessionYP_001748683 
Protein GI170720995 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.404881 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.217331 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATT TCAGCACCCT CGAAGTGATC CGTGACCCGC GCGGCTTCGC CACCCTGTGG 
CTGAGCCGCG AGGACAAGAA CAACGCATTC AATGCACAGA TGATCCGCGA GCTGATCGTC
GCCCTCGGGC AACTGGCCGA CGACGCCAGC CTGCGCTTCA TGCTGCTGCG CGGCCGTGGC
CGCCATTTCA GCGCTGGCGC AGACCTGGCG TGGATGCAGC AATCGGCACA ACTGGACTTC
AACACCAACC TGGATGACGC CCGTGAACTG GGCGAACTGA TGTACGCCCT GCATCGCCTG
AAGGTACCCA CCCTGGCCGT GGTGCAGGGC GCGGCCTTTG GCGGCGCCTT GGGGTTGATC
AGTTGCTGCG ACATGGCCAT CGGCGCCGAG GATGCGCAGC TGTGCCTGTC CGAAGTACGC
ATCGGCCTGG CCCCGGCGGT GATCAGCCCG TTCGTGGTCA AGGCCATCGG TGAGCGTACC
GCGCGCCGTT ATGCCCTGAC CGCCGAACGC TTCAGCGGCG TACGGGCCCG GGAACTGGGC
CTGTTGGCAG AGGTGTACCC GGCCAGTGAG CTGGAAGTGC AGGTACAGGC CTGGGTAGAC
AACCTCTTGC AGAACAGCCC GCAAGCACTG CGCGCTACCA AGGACCTGCT GCGCGAGGTC
GATGACGGTG AACTCAGCCC TGCCCTGCGC CGCTACTGCG AAAACGCCAT TGCCCGTATC
CGTGTCAGCG CCGAAGGTCA GGAGGGCCTG CGCGCCTTCC TGGAAAAACG TCGCCCCGCT
TGGCAGACCG AGCCCAACAA GGAGCCGCGC CCATGA
 
Protein sequence
MSDFSTLEVI RDPRGFATLW LSREDKNNAF NAQMIRELIV ALGQLADDAS LRFMLLRGRG 
RHFSAGADLA WMQQSAQLDF NTNLDDAREL GELMYALHRL KVPTLAVVQG AAFGGALGLI
SCCDMAIGAE DAQLCLSEVR IGLAPAVISP FVVKAIGERT ARRYALTAER FSGVRARELG
LLAEVYPASE LEVQVQAWVD NLLQNSPQAL RATKDLLREV DDGELSPALR RYCENAIARI
RVSAEGQEGL RAFLEKRRPA WQTEPNKEPR P