Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1808 |
Symbol | |
ID | 6110759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 2010975 |
End bp | 2011682 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641621604 |
Product | XRE family transcriptional regulator |
Protein accession | YP_001748681 |
Protein GI | 170720993 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.630846 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.212121 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTATTG AGCGCCAGAA GGCAGTCCGT ATCGTGCCAG CGATGAATAT GGATAAATGG ATTGCCCTCG TCCGTGACCG GATGGAGGAG CTCGATATCT CCCAAGAACA GCTCGCCGAA CGCGTTGGGG TTTCCCAGGG CAGCGTGGGG CATTGGGTGA ACAAGCGGCG CCAGCCCAAG GTCGAGTCGA TGAACCGCGT CTTCGTCGAG CTGGGCATGC CCCACTACCA CGTCAGCATG CAACTGCGGG TACTGGGCCA GGTGGGTGAA GACAGTGGCC GCTATGTGCT GGATGAAGAG GATGACGATG TAGACCTGAT GCAATACATC GTGTGTTTTC GTTACCCCGT GCGTGGCTGG GATGCGTTGG CTGACTCAGC GCACGAGCAG GGCACGGTGT TCGAGCAGAC CGAGTACCTC GCCCAAGGTA AAGCGTTCTG GTTGACCGTA GAGAACGATG CCATGAGTAC TGCCAGTGGC CGTAGCGTGC CCCAGGGCAT GCGCATTCTG GTGGACCCGG GGCTGGAGGC TGAGCCTGGG AGGTTGGTAA TTGCGCGCCA ACCTGGCAAA TCGGCGATTC TCCGCGAGCT GGCCGAAGAG GGTGGGCAGC GGTATCTGAA GGCGCTGAAC AGCAGCTACC CGGCGTTGGT GTGTGAGGAC GGGTGTGAGT TTCTCGGGGT GGTTGTGCGG GTGCACGGCA CCTTCTAG
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Protein sequence | MFIERQKAVR IVPAMNMDKW IALVRDRMEE LDISQEQLAE RVGVSQGSVG HWVNKRRQPK VESMNRVFVE LGMPHYHVSM QLRVLGQVGE DSGRYVLDEE DDDVDLMQYI VCFRYPVRGW DALADSAHEQ GTVFEQTEYL AQGKAFWLTV ENDAMSTASG RSVPQGMRIL VDPGLEAEPG RLVIARQPGK SAILRELAEE GGQRYLKALN SSYPALVCED GCEFLGVVVR VHGTF
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