Gene PputW619_1808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_1808 
Symbol 
ID6110759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp2010975 
End bp2011682 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content60% 
IMG OID641621604 
ProductXRE family transcriptional regulator 
Protein accessionYP_001748681 
Protein GI170720993 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.630846 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.212121 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTATTG AGCGCCAGAA GGCAGTCCGT ATCGTGCCAG CGATGAATAT GGATAAATGG 
ATTGCCCTCG TCCGTGACCG GATGGAGGAG CTCGATATCT CCCAAGAACA GCTCGCCGAA
CGCGTTGGGG TTTCCCAGGG CAGCGTGGGG CATTGGGTGA ACAAGCGGCG CCAGCCCAAG
GTCGAGTCGA TGAACCGCGT CTTCGTCGAG CTGGGCATGC CCCACTACCA CGTCAGCATG
CAACTGCGGG TACTGGGCCA GGTGGGTGAA GACAGTGGCC GCTATGTGCT GGATGAAGAG
GATGACGATG TAGACCTGAT GCAATACATC GTGTGTTTTC GTTACCCCGT GCGTGGCTGG
GATGCGTTGG CTGACTCAGC GCACGAGCAG GGCACGGTGT TCGAGCAGAC CGAGTACCTC
GCCCAAGGTA AAGCGTTCTG GTTGACCGTA GAGAACGATG CCATGAGTAC TGCCAGTGGC
CGTAGCGTGC CCCAGGGCAT GCGCATTCTG GTGGACCCGG GGCTGGAGGC TGAGCCTGGG
AGGTTGGTAA TTGCGCGCCA ACCTGGCAAA TCGGCGATTC TCCGCGAGCT GGCCGAAGAG
GGTGGGCAGC GGTATCTGAA GGCGCTGAAC AGCAGCTACC CGGCGTTGGT GTGTGAGGAC
GGGTGTGAGT TTCTCGGGGT GGTTGTGCGG GTGCACGGCA CCTTCTAG
 
Protein sequence
MFIERQKAVR IVPAMNMDKW IALVRDRMEE LDISQEQLAE RVGVSQGSVG HWVNKRRQPK 
VESMNRVFVE LGMPHYHVSM QLRVLGQVGE DSGRYVLDEE DDDVDLMQYI VCFRYPVRGW
DALADSAHEQ GTVFEQTEYL AQGKAFWLTV ENDAMSTASG RSVPQGMRIL VDPGLEAEPG
RLVIARQPGK SAILRELAEE GGQRYLKALN SSYPALVCED GCEFLGVVVR VHGTF