Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1803 |
Symbol | |
ID | 6110754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 2005897 |
End bp | 2006868 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641621599 |
Product | spore coat U domain-containing protein |
Protein accession | YP_001748676 |
Protein GI | 170720988 |
COG category | [S] Function unknown |
COG ID | [COG5430] Uncharacterized secreted protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0188481 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.102888 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGAGCG TATTGCGCGG CCTGTTGATC GCAATGCTAT GGCTGCCGGT GGGTTCGGCT TGGGCGTTAT GCTCGTCCGT CGCGACCGCG CCAGCGGCGT TCGGTACCGT CAACTCAACG CTGGTGCGCA CTGGCATCCA GAGTGCCTCC ACCACCAATG CGGGTTTGCA GTGCACCGGT TCGTTGTTGT CCCTGCTGGT GAGCAGTGAC CACTTCTACC TCACCATCAC CTCAGCTACC AGCGGGCTGG TGGGGCCGAG CGGGGATGTC ATCCCTTATA CGATCTATGC CAATAATACG ACCAGCTACC CCATCACTCG CGGCGCGCAG TTCGATTTCG CCCGCAATGG CCTGATCGAC GCCCTGGGCC TGCTCAATGG CAATTCCCCG AAGTCTGTGC CGCTGTATTT GAAAACTTCG GTTGGCGCCA ACGTGGCCGC CGGCGTCTAT ACCGAGACGC TTAACCTTGC CTGGGTCTGG AACTATTGCT CGGGCATTGG CCTGGGCAAT CTGTGCCTGG GGCGCGACAC AGGCGCGGGG AACCAGACCC TCACGGTGAC CCTGACGGTA AGTAATGATT GCCAGATCAC AACGCCCACC ATCAGCTTTG GCAGCGCACC GGTAGTGGCG GGGTTCGGCA CGGTGAACCA GAGCGTGAAC CTGTCCTGCA CCAAGGGCAG CAGCTACACG GTCGGGCTGG ATGACGGGCA GAACGCATCT GGCGGGCGTC GGAGGATGAA GTCTGCTGCC AACAACTACC TGGCCTACGA CATCTTCAAG AGCGCGGGCG CGGTACGTTG GGGAGCAGTG GGCAGCGCGC GGCGTTCCAG CAGCGATGCC AATATCAACC CCGGAGCTGG GACTGGCACC GGTAGCCAGG TGTTCAACTA CAACGCCAAG GTCTATACCG ACCAGGCGAC ACCGCCGGCG GCGACCTATA CCGACAATGT GATACTCGAT GTGCAGTTTT GA
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Protein sequence | MRSVLRGLLI AMLWLPVGSA WALCSSVATA PAAFGTVNST LVRTGIQSAS TTNAGLQCTG SLLSLLVSSD HFYLTITSAT SGLVGPSGDV IPYTIYANNT TSYPITRGAQ FDFARNGLID ALGLLNGNSP KSVPLYLKTS VGANVAAGVY TETLNLAWVW NYCSGIGLGN LCLGRDTGAG NQTLTVTLTV SNDCQITTPT ISFGSAPVVA GFGTVNQSVN LSCTKGSSYT VGLDDGQNAS GGRRRMKSAA NNYLAYDIFK SAGAVRWGAV GSARRSSSDA NINPGAGTGT GSQVFNYNAK VYTDQATPPA ATYTDNVILD VQF
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