| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1802 |
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| Symbol | |
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| ID | 6110753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 2003555 |
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| End bp | 2005900 |
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| Gene Length | 2346 bp |
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| Protein Length | 781 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641621598 |
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| Product | fimbrial biogenesis outer membrane usher protein |
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| Protein accession | YP_001748675 |
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| Protein GI | 170720987 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0548904 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.220264 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAATGGC TGTCGCGTGC GACGCGCCGC TGGTGCCTGG GGCTGGCGGT TATCGGCCCC
GGCCTGGCGG TGGCCGACGA GCTGCCGCCG CCGCCCACCG AGGCCGCCGC CATTGCCGAC
GCCACACTGT ATCTGGACCT GCTGGTGAAC CAGGTGCCCA GGGCTGAGCT GGTACCGGTG
CAGCAGCGTG CCGGGGGGCT GTTCCTCGAC AGCCAGGTGC TACGCGCTGC CGGCATCGCC
CTGCCGGGCA ATCCGCAAGG CGAGGTGGCC CTGGATGCCG TAGCGGGCCT GCACTGCGAT
TACGACAGCC AGAACCAGCG CCTGTTGCTG CAAGTCCCAC CGGCCTGGCT CCCGGACCAG
CAAGTCGGCA ACCGTAACCT GTACCCGGCC AGCGATGCAC GCAGCAGTTT CGGTGCGTTG
TTCAACTATG ACCTGTACCT CAACGACACC GACGAGGGTG GCACTTACCT GGCTGCGTGG
AATGAGCTAC GCCTGTTCGA CAGTTGGGGC ACCTTTGCCA CCACCGGTCA GTGGCGGCAG
TCGTTCAACG GCGCCGCGGC CGACGCCAGC CGCCAGGGTT TCCTGCGCTA CGACACTACT
TGGCGCTTCA CCGACGAGCA GCGCCTGCTG ACTTACGAAG CGGGCGACTT CGTCACCGGG
GCGTTGCCCT GGACCAGTTC GGTACGGGTG GGCGGCCTGC AGTTGTCGCG TGACTTTGCC
GTCCGCCCTG ACCTGGTCAC TTATCCGTTG CCTGCCTTCG CGGGAGAGGC GGCGGTGCCG
ACCTCACTGG ATCTGTTCAT CAACGGCTAC AAGTCCAGCA CCGCCGAGTT GCAGCCAGGC
CCCTACACCC TGACCAACGT GCCGTTCATC AACGGTGCCG GCGAGGCCGT GGTGGTTACC
ACCGATGCAC TTGGGCGCCA GGTGTCCACC ACGTTGCCGT TCTACGTCAC CAGCAGCCTG
CTGCAAAAAG GCCTTTCGGA TTTCTCGATG GCCGCCGGCA GCCTGCGCCG AGACTATGCA
GTGCGCGACT TCAGCTACGG GCCCGGCGTC GCCTCGGCCA GCCTGCGTCA TGGCGTCAGC
GATTTCTTCA CCCTCGAAAG CCATGTCGAA ACCGCAGAAT CGTTGCTGCT TGGGGGTTTG
GGTGCGAATG TGCGCCTGGG CACTTTCGGT GTACTGAACG CTGCCATGGC GCAGAGCCAG
TTCGACAGTG AAAAGGGCCA CCAGGTTGCC CTCGGCTATC AGTACAACAG CCAGCGCCTC
GGTTTCAGCT ATCAGCGCTT GCAGCGCCAT GGTCATTACG CCGACCTGAG CCGGGTCGAC
AGCCCGGACA TGCAATTGAG CCAGCGTAGC GAGCAGGTCA CCCTGAGCCT GAACCTCGAC
CGCTTCGGCA GCCTCGGCGC GGGCTACTTC GATGTGCGCG CCGGTGACGG CTCGCGCACC
CGGCTGATCA ACCTGAGCTG GAGCAAACCG CTGTGGGGCA ACAGCAGTGT CTACCTGTCG
GCCAACCGTG AGGTCGGCGA CAGCCAGTGG GCGGTGCAGG CACAGTGGGT GATCCCGATC
GACTTCAGCG GTACCCTTGC CGTGAGCATG GAACGCAGCA AGGAAGGCGA GGACCTGCAG
CGGGTCAACT ACAGCCGTGC GGTACCGGTG GGCGGCGGTG TTGGCTACAA CCTTGGCTAC
GCCACCGCAG GTGATCGCGA TGCCTACCGC CAGGCCGACG CCACCTGGCG CCTGCAGTCG
GTGCAATTGC AGGCCGGCGT GTACGGCAGC AGCGGCGAAA TGACCCGCTG GGCCGATGCC
AGCGGCTCGC TGGTGTGGAT GGACGCCGGG CTGTTCGCCG CCAACCGTAT CGACGATGCC
TTTGTGGTGG TCAGCACCGG CGGCTATGCC GATGTGCCCG TGCGTTACGA AAACCAAGAG
ATCGGCCGCA CCGACCGCAA CGGCCACCTG CTGGTGCCGT ACAGCAGCGG CTACTACCGC
GGCAAGTACG AGATCGACCC CATGGACCTG CCGCCCGATG TGCTCGCGGC GCAGGTGGAG
CAGCGGGTAG CGGTGCGCCG TGGCAGCGGC TACTTGCTGG AGTTCCCGCT CAAGCGCGTG
CTGGCGGCCA GCATCGAGCT GGTAGATGGC AACCAGCAGC CGCTCAAGCT GGGCAGTACG
GTCAGCCACC GTGAAAGTGG CAGCCAGGCG GTGGTGGGCT GGGACGGGCT GGTGTATCTG
GAGAACCTCT CAGCGCACAA CCACCTGCAG GTCGGGCTGG AGGGAGGAGG GCAGTGCCAG
GTCGAGTTCG ACTTGCCGCA GGCAGAAGGC TCGATCCCGT TGATCGGCCC GTTGGTGTGC
CGATGA
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| Protein sequence | MKWLSRATRR WCLGLAVIGP GLAVADELPP PPTEAAAIAD ATLYLDLLVN QVPRAELVPV
QQRAGGLFLD SQVLRAAGIA LPGNPQGEVA LDAVAGLHCD YDSQNQRLLL QVPPAWLPDQ
QVGNRNLYPA SDARSSFGAL FNYDLYLNDT DEGGTYLAAW NELRLFDSWG TFATTGQWRQ
SFNGAAADAS RQGFLRYDTT WRFTDEQRLL TYEAGDFVTG ALPWTSSVRV GGLQLSRDFA
VRPDLVTYPL PAFAGEAAVP TSLDLFINGY KSSTAELQPG PYTLTNVPFI NGAGEAVVVT
TDALGRQVST TLPFYVTSSL LQKGLSDFSM AAGSLRRDYA VRDFSYGPGV ASASLRHGVS
DFFTLESHVE TAESLLLGGL GANVRLGTFG VLNAAMAQSQ FDSEKGHQVA LGYQYNSQRL
GFSYQRLQRH GHYADLSRVD SPDMQLSQRS EQVTLSLNLD RFGSLGAGYF DVRAGDGSRT
RLINLSWSKP LWGNSSVYLS ANREVGDSQW AVQAQWVIPI DFSGTLAVSM ERSKEGEDLQ
RVNYSRAVPV GGGVGYNLGY ATAGDRDAYR QADATWRLQS VQLQAGVYGS SGEMTRWADA
SGSLVWMDAG LFAANRIDDA FVVVSTGGYA DVPVRYENQE IGRTDRNGHL LVPYSSGYYR
GKYEIDPMDL PPDVLAAQVE QRVAVRRGSG YLLEFPLKRV LAASIELVDG NQQPLKLGST
VSHRESGSQA VVGWDGLVYL ENLSAHNHLQ VGLEGGGQCQ VEFDLPQAEG SIPLIGPLVC
R
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