| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1778 |
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| Symbol | |
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| ID | 6110728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 1977420 |
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| End bp | 1978610 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641621573 |
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| Product | AcnD-accessory protein PrpF |
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| Protein accession | YP_001748651 |
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| Protein GI | 170720963 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2828] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR02334] probable AcnD-accessory protein PrpF |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.152698 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00100052 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCACACG CACCACAAAT CAAGATCCCC GCCACCTACA TCCGCGGCGG CACCAGCAAA
GGCGTGTTCT TCCGCCTGCA AGACCTCCCT GAACCAGCTC AAGCCCCAGG GCCGGCCCGT
GACGCACTGC TACTGCGGGT CATCGGCAGC CCTGACCCCT ATGCCAAGCA GATCGACGGC
ATGGGTGGCG CCACTTCAAG CACCAGCAAA ACCGTGATCC TGTCGCAAAG CACCAGGCCC
GACCACGACG TCGACTACCT GTTCGGCCAG GTAGCCATCG ACAAGGCCTT CGTCGACTGG
AGCGGCAACT GCGGCAACCT GTCTGCTGCT GTCGGCTCGT TCGCCATCAG CAGTGGCTTG
GTCGAGCCGT CGCGCATCCC GCGCAATGGC GTTGCCACCG TGCGTATCTG GCAGGCCAAT
ATAGGCAAGA CCATCATCGC TCATGTGCCG ATCACCGAGG GCCAAGTGCA GGAAACCGGC
GACTTCGAGC TCGACGGTGT GACGTTCCCG GCGGCAGAGG TGCAACTGGA ATTCCTTGAT
CCGGCGGCCG ATGAGGGTGA AGGCGGCGGT GCGATGTTCC CTACCGGTAA CCTGGTGGAT
GACCTGGAAG TGCCCGGTGT CGGTACCTTC AAAGCCACCT TGATCAACGC CGGTATCCCG
ACCATTTTCG TCAATGCCTC CGATATCGGT TATGCCGGCA CCGAGCTGCA GGATGCGATC
AACGGCGATG CGCAAGCGCT GACGCGTTTC GAGGCGATCC GTGCCCATGG CGCCGTGCGC
ATGGGGCTGA TCGAACATGT CGACCAGGCG GCCGGGCGTC AGCACACGCC GAAGGTGGCT
TTCGTTGCGC CGCCAAGCAC CTACACTGCG TCCAGTGGCA AGGCTGTCGA GGCGGCTGAC
ATCGACCTGC TGGTGCGTGC ACTTTCCATG GGCAAGTTGC ACCACGCGAT GATGGGTACT
GCTGCGGTGG CCATCGGTAC CGCTGCTGCC ATTCCAGGTA CGCTGGTCAA CCTCGCTGCT
GGCGGGGGCG AGCGCAGTGC CGTGCGCTTC GGCCATCCCT CCGGCACCTT GCGGGTCGGG
GCTCAGGCCA GCCAGGTGGA TGGCGAGTGG ACGGTCACCA AGGCAATCAT GAGTCGTAGT
GCCCGGGTGT TGATGGAAGG CTGGGTAAGG GTGCCTGGCG ACAGCTTCTG A
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| Protein sequence | MAHAPQIKIP ATYIRGGTSK GVFFRLQDLP EPAQAPGPAR DALLLRVIGS PDPYAKQIDG
MGGATSSTSK TVILSQSTRP DHDVDYLFGQ VAIDKAFVDW SGNCGNLSAA VGSFAISSGL
VEPSRIPRNG VATVRIWQAN IGKTIIAHVP ITEGQVQETG DFELDGVTFP AAEVQLEFLD
PAADEGEGGG AMFPTGNLVD DLEVPGVGTF KATLINAGIP TIFVNASDIG YAGTELQDAI
NGDAQALTRF EAIRAHGAVR MGLIEHVDQA AGRQHTPKVA FVAPPSTYTA SSGKAVEAAD
IDLLVRALSM GKLHHAMMGT AAVAIGTAAA IPGTLVNLAA GGGERSAVRF GHPSGTLRVG
AQASQVDGEW TVTKAIMSRS ARVLMEGWVR VPGDSF
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