Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1777 |
Symbol | |
ID | 6110727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 1974692 |
End bp | 1977280 |
Gene Length | 2589 bp |
Protein Length | 862 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641621572 |
Product | aconitate hydratase |
Protein accession | YP_001748650 |
Protein GI | 170720962 |
COG category | [C] Energy production and conversion |
COG ID | [COG1048] Aconitase A |
TIGRFAM ID | [TIGR01341] aconitate hydratase 1 [TIGR02333] 2-methylisocitrate dehydratase, Fe/S-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00224724 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.000953384 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACACTG CATACCGCAA AGCCCTGCCA GGCACTGACC TGGACTATTT CGACGCCCGT GCTGCGGTCG AGGCCATCAA GCCCGGTGCC TACGACAGCC TGCCTTACAC CTCGCGCGTG CTCGCCGAAA ACCTGGTGCG CCGCTGCGAC CCTGCAACCC TGAGCGCCTC GCTCGGCCAG CTGATCGAAC GCAAGCGTGA TCTTGACTTC CCGTGGTTCC CGGCCCGCGT GGTGTGCCAC GACATCCTCG GCCAGACCGC GCTGGTCGAC CTCGCCGGCC TGCGTGACGC CATCGCCGAA AAAGGCGGCG ACCCGGCGGC GGTCAACCCT GTCGTGCCGG TGCAACTGAT CGTCGATCAC TCGCTGGCCG TCGAGTGCGG TGGCTTCGAC CCGCAGGCCT TTGACAAGAA CCGCGCCATC GAAGACCGTC GCAACGAAGA CCGCTTCCAT TTCATCAACT GGACCAAGAA GGCGTTCAAG AACGTCGATG TGATCCAGCC CGGTAACGGC ATCATGCACC AGATCAATCT GGAGAAAATG TCGCCGGTAA TTCACAACGA TCGCGGTGTT GCCTACCCGG ACACCTGCGT GGGCACCGAC AGCCATACTC CACATGTCGA CGCCCTGGGC GTGATCGCCA TCGGCGTCGG CGGCCTCGAA GCTGAAAATG TCATGCTGGG CCGCGCCTCC TGGATGCGCC TGCCGGAAAT TGTCGGCGTG GAGCTCAGCG GCAAGCTGGC GCCCAACATC ACCGCCACCG ACCTGGTGCT GGCCTTGACC GAGTTCCTGC GCAAGCAGAA GGTGGTTGGC GCCTACCTTG AGTTCTACGG CGAAGGTGCA CGCGCCCTGA CCCTCGGCGA CCGTGCGACC ATCTCCAACA TGGCACCGGA ATATGGTGCA ACCGCTGCAA TGTTCGCCAT CGACCAGCAA ACCATCGACT ACCTGAAACT GACCGGCCGT GAAGATCAGC AGGTTAAACT GGTGGAGACC TACGCCAAGG CCACGGGTTT GTGGGCTGAC GCGTTGGTGA AGGCCGAATA CGAACGCGTG CTGAGCTTCG ACCTGTCGAG CGTGGTGCGC AACATGGCCG GGCCGTCCAA CCCGCATGCC CGTGTTGCCA CCAGTGAGCT GGCAGCCAAG GGCATCGCTG GTGCCTGGGA CGAGATACCG GGGCAGATGC CTGACGGCGC AGTGATCATC GCTGCGATTA CCAGTTGCAC CAACACCAGC AACCCGCGCA ACGTGATCGC AGCTGGCCTG CTGGCACGCA ATGCCAACAA GCTCGGCCTG GCACGCAAGC CGTGGGTCAA GTCTTCGCTC GCGCCCGGCT CCAAGGCAGT GCAGCTGTAC CTGGAGGAAG CGGGGCTGGA GAAGGAGCTG GAGCAACTGG GCTTCGGTAT CGTCGCTTTC GCCTGCACCA CCTGCAACGG CATGTCCGGT GCTTTGGACC CGGTGATTCA GCAGGAAATC ATCGACCGTG ACCTCTACGC GACGGCGGTG CTCTCGGGCA ACCGCAACTT CGATGGGCGC ATCCACCCGT ACGCCAAGCA GGCATTCCTC GCTTCGCCGC CGCTGGTGGT GGCCTATGCC ATTGCCGGCA CTATCCGCTT CGACATCGAG AAGGATGTAC TGGGCGTAGT CGATGGTCAG GAGATCCGCC TCAAGGACAT CTGGCCAAGC GACGAAGAGA TCGACGCGGT GGTGCGCGCG GCGGTCAAAC CGGAGCAGTT CCGCAAGGTC TACATCCCGA TGTTCGCTAT CGAGGAAGAC CGTGGGCCGA AAGTGGCGCC GCTTTACGAG TGGCGTCCGA TGAGTACCTA TATCCGCCGC CCGCCCTACT GGGAAGGCGC CCTGGCCGGT GAGCGCACGT TGCGCGGCAT GCGTCCGTTG GCGGTGCTGC CGGACAACAT CACCACCGAC CACCTGTCAC CTTCCAATGC CATTCTGCTC GACAGCGCGG CGGGTGAATA CCTGGCCAAG ATGGGCTTGC CGGAGGAGGA CTTCAACTCC TACGCCACGC ACCGCGGCGA CCACCTGACG GCACAGCGTG CCACATTCGC CAACCCCAAG CTGTTCAACG AGATGGTGCG CAAACCCGAT GGCAGCGTGC AGCAGGGTTC GCTGGCGCGC CTGGAGCCGG AGGGCAAGGT GACCCGGATG TGGGAAGCCA TCGAAACCTA CATGCAGCGC AAGCAGCCGC TGATCATCGT TGCCGGTGCC GACTATGGGC AAGGCTCGTC CCGCGACTGG GCGGCCAAGG GCGTGCGGCT GGCGGGCGTC GAGGCGATCG TGGCCGAAGG CTTCGAGCGC ATTCACCGCA CCAACCTGGT GGGCATGGGC GTCCTGCCGC TGGAATTCCT GCCGGGGACC GACCGCAAGA CCCTGGGCCT GGATGGCAGC GAGACCTATG ACGTGGCAGG TGAGCGCAAG CCGCGTGCAA CCCTGACGCT GGTGGTTACG CGCCGCAATG GCGAACGGGT CGAGGTGCCG GTGACCTGCC GGCTCGATAC CGCCGAAGAG GTGTCGATCT ACGAGGCGGG CGGGGTACTG CAGCGCTTCG CCCAGGATTT CCTCGAAGCC ACCGCCTGA
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Protein sequence | MNTAYRKALP GTDLDYFDAR AAVEAIKPGA YDSLPYTSRV LAENLVRRCD PATLSASLGQ LIERKRDLDF PWFPARVVCH DILGQTALVD LAGLRDAIAE KGGDPAAVNP VVPVQLIVDH SLAVECGGFD PQAFDKNRAI EDRRNEDRFH FINWTKKAFK NVDVIQPGNG IMHQINLEKM SPVIHNDRGV AYPDTCVGTD SHTPHVDALG VIAIGVGGLE AENVMLGRAS WMRLPEIVGV ELSGKLAPNI TATDLVLALT EFLRKQKVVG AYLEFYGEGA RALTLGDRAT ISNMAPEYGA TAAMFAIDQQ TIDYLKLTGR EDQQVKLVET YAKATGLWAD ALVKAEYERV LSFDLSSVVR NMAGPSNPHA RVATSELAAK GIAGAWDEIP GQMPDGAVII AAITSCTNTS NPRNVIAAGL LARNANKLGL ARKPWVKSSL APGSKAVQLY LEEAGLEKEL EQLGFGIVAF ACTTCNGMSG ALDPVIQQEI IDRDLYATAV LSGNRNFDGR IHPYAKQAFL ASPPLVVAYA IAGTIRFDIE KDVLGVVDGQ EIRLKDIWPS DEEIDAVVRA AVKPEQFRKV YIPMFAIEED RGPKVAPLYE WRPMSTYIRR PPYWEGALAG ERTLRGMRPL AVLPDNITTD HLSPSNAILL DSAAGEYLAK MGLPEEDFNS YATHRGDHLT AQRATFANPK LFNEMVRKPD GSVQQGSLAR LEPEGKVTRM WEAIETYMQR KQPLIIVAGA DYGQGSSRDW AAKGVRLAGV EAIVAEGFER IHRTNLVGMG VLPLEFLPGT DRKTLGLDGS ETYDVAGERK PRATLTLVVT RRNGERVEVP VTCRLDTAEE VSIYEAGGVL QRFAQDFLEA TA
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