| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1757 |
|---|
| Symbol | greB |
|---|
| ID | 6110707 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 1954823 |
|---|
| End bp | 1955296 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641621552 |
|---|
| Product | transcription elongation factor GreB |
|---|
| Protein accession | YP_001748630 |
|---|
| Protein GI | 170720942 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0782] Transcription elongation factor |
|---|
| TIGRFAM ID | [TIGR01461] transcription elongation factor GreB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.000000000601316 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | TTGAGTACCA ATATCATCAC GACAGAAGGC CATGAAGCTC TGAAGAAAGA GTTGGACCAT
CTGTGGCGGG TGTATCGCCC GGAAATTACC CAGAAGGTGG CTTGGGCTGC CTCGCTGGGG
GATCGCAGCG AGAATGCCGA CTACCAGTAC AACAAGAAGT TGCTGCGTGA GATCGACCGT
CGGGTCCGAT ACCTGCGCAA GCGCCTCGAA GACGTCAAAG TGGTTGCCTA TTCGCCGCAG
CAGGAGGGCA AGGTCTTCTT CGGTGCCTGG GTGGAGATCG AAAATGATGA CGGCGAAACC
CTGAAGTTTC GCATCGTCGG GTACGACGAG ATCTATGGAC GCAATGACTA TATCTCGATC
GATTCGCCGA TGGCGCGGGC CCTGCTCAAG AAAGAGAAGG GTGATGAGGT GGTGGTGCAC
ACACCTACCG GCGAAGCGAC CTGGTATGTA AGCAGCATAA GTTACGAACA GTAA
|
|---|
| Protein sequence | MSTNIITTEG HEALKKELDH LWRVYRPEIT QKVAWAASLG DRSENADYQY NKKLLREIDR
RVRYLRKRLE DVKVVAYSPQ QEGKVFFGAW VEIENDDGET LKFRIVGYDE IYGRNDYISI
DSPMARALLK KEKGDEVVVH TPTGEATWYV SSISYEQ
|
|---|
| |