| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1754 |
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| Symbol | |
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| ID | 6110704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 1952333 |
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| End bp | 1953739 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641621549 |
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| Product | lytic transglycosylase catalytic |
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| Protein accession | YP_001748627 |
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| Protein GI | 170720939 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000000408908 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGCGAT ACCTGCTCGC CCTGCTGCTG GCGTTTGGCC TGATGAGCGT CGGTCCCGCC
TACGCACGCC TGCCGGGGCC GCAGCAGAAC GTGCCGGTGA GCAAGGCCCG TGACCTTGAA
CAGATCCGCA GCAGCAAGGT GCTGCGGGTA CTGGTCAATC AAAGTCGCAA TAGCTCCGGT
GAGGTCAAGG GCGAGCCCGT CGGTATCGAG TACTACCGCT TGCGTGCGCT TGAGCATTAC
CTCAACGCTC GGGCCGGCGA CGGGCAACAG GTGCAGCTCA AACTCATCCC CAGAGCCAAA
GAGCAACTAC TCGGGGCCCT GCAGCGCGGT GAGGGCGACC TTGCCGCCCC GGGCGAATTG
CTCGACCCGA GCCTGGTCGG TGGCGTGAAC AGCAGTGCTC CGGTCCTGGA CCAAGTGCCG
CTGTGGCTGG TCGGGCGCAA GGGCGAGCGC AGTTTCACCC GTGTCGAGCA GTTGTCCGGG
CGCACCGTGG CGCTGACCAG TGCCAGTGCC GCCGGCGCGC TGATCCAGCA GATCAACCAG
CACCTGGCGC TGCGCAAGCG CCCGCCCGTC AAGATCGAGT GGGTCGATTC GACCCTGGCG
GTGGAGGACG TGCTGGAGAT GGTCCAGGCC GGCATCTATC ACCTGACCGT GGTGGAGCGG
CCGATCGCGC TGCGCTGGGC TCGGGTAATG CCACGCCTGC GCCTGGATAG CCGCCTGCAA
CTGGGCCCGC CGCAAGCCAT GCGCTGGTAT GTGCGGCGTG ATGCGACGCT GCTGCAGGCC
ACGGTCGATC GTTTTTTGCA GGGCTACCGT GCGCCGGAGA ACCAGGACGC TGCCTTCGAG
CGCATCTACC GGCGCCAGTA CCGCGTGCAC AACCCGCTTG CGCGCAAGGA CCGTCAGCGC
CTGGCTTCTG TGCGCGCGGT GCTGCAGAAA CATGGCCAGG CGCAACAGAT CGACTGGTTG
AACCTTGCCG CTTTGGCCTT CAAGGAGTCG ACCCTCAACC CGGCGGCGCG CGGCAGTGGC
GGGGCGCATG GCCTGATGCA GATCACTCCT GCAGCTGCCC AACGGGTCGG GGTCAGCAAT
ACCGCAACGG TGGATGGCAA TGTCCAGGCC AGCGCCCGTT ACCTGGCGTT GATACGCCGC
AAGTTCTTTG CCAGCCCGCA GATCAACGAG CGTGAGCGCA TGGCCTTTGT GCTGGCCGCC
TACAACCTTG GGCCCGAGCG GGTCCAGGCC ATGCGTGTCG AGGCTCGCAA GCGTGGCCTC
AATGGCAATC AATGGTTCTT TCAGACCGAA CGGGTCGCGA TGGAGCAGGT GGGCATGGGG
CCGGTGAACT TCGTCAACAG CGTGAACAAG TACTTCCTGG CGTTCAACCG TGAGCGTGCG
GTGCTGGAGC GGAGGGCCAA GCGCTAA
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| Protein sequence | MLRYLLALLL AFGLMSVGPA YARLPGPQQN VPVSKARDLE QIRSSKVLRV LVNQSRNSSG
EVKGEPVGIE YYRLRALEHY LNARAGDGQQ VQLKLIPRAK EQLLGALQRG EGDLAAPGEL
LDPSLVGGVN SSAPVLDQVP LWLVGRKGER SFTRVEQLSG RTVALTSASA AGALIQQINQ
HLALRKRPPV KIEWVDSTLA VEDVLEMVQA GIYHLTVVER PIALRWARVM PRLRLDSRLQ
LGPPQAMRWY VRRDATLLQA TVDRFLQGYR APENQDAAFE RIYRRQYRVH NPLARKDRQR
LASVRAVLQK HGQAQQIDWL NLAALAFKES TLNPAARGSG GAHGLMQITP AAAQRVGVSN
TATVDGNVQA SARYLALIRR KFFASPQINE RERMAFVLAA YNLGPERVQA MRVEARKRGL
NGNQWFFQTE RVAMEQVGMG PVNFVNSVNK YFLAFNRERA VLERRAKR
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