| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1738 |
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| Symbol | |
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| ID | 6110684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 1933459 |
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| End bp | 1935198 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641621529 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001748611 |
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| Protein GI | 170720923 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.217891 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCATA ACAAACACAA CCGGCGACAT TTGACCCTGG CCGCGATGCT GGTACTGGCC
GGCGTGCACG GTGCGGCGTG GGCCGATCAG TACGAGGATG CGGCATCGAA ATGGATCGGC
AGCGAGTTCA AACCTTCGAC CCTCACGCCG GAGCAGCAGT TGGCCGAGCT CAAGTGGTTC
ATCAAGGCAG CAGAGCCGTT TCGCGGGATG AAGATCAATG TGGTGTCGGA AACCATCACA
ACCCATGAGT ACGAGTCCAA GGTGCTGGCC AAGGCCTTCA GCGAGATCAC CGGTATCCAG
CTGACCCACG ACCTGCTGCA GGAAGGCGAC GTGGTAGAGA AGCTGCAGAC GCAGATGCAG
TCGGACAAGA ACATCTACGA CGGCTGGGTC AACGACTCCG ACCTGATCGG TACGCATTTT
CGCTACGGCA AGGTGGAGTC GATCACTGAT CTGATGGCCA ACGAAGGCAA GGATTACACC
TCGCCGACCC TGGACCTGAA GGACTTCATT GGCATTTCGT TCACCACCGC GCCGGATGGC
AAGGTTTATC AGTTGCCCGA CCAGCAGTTC GCCAACCTGT ACTGGTTCCG CGCCGACTGG
TTCGAGCGGC CCGAGCTCAA GGCCAGGTTC AAGGAAAAGT ACGGTTACGA GTTGGGCGTG
CCGGTGAACT GGTCGGCCTA TGAGGACATC GCCAAGTTTT TTACCGAGGA CGTCAAGGAG
ATCGACGGCA AGCGTGTCTA TGGCCACATG GACTACGGCA AGAAGGATCC TTCATTGGGG
TGGCGTTTCA CAGATGCCTG GTTCTCCATG GCCGGCGGCG GCGACAAAGG CCTGCCCAAT
GGCTTGCCGG TGGACGAGTG GGGCATCCGC GTGGAGGATT GCCACCCGGT AGGGTCCAGC
GTGACCCGCG GCGGCGACAC CAATGGGCCG GCGGCTGTCT ATGCCACGCA GAAGTACGTC
GACTGGATGC GCGCCTATGC GCCCAAGGAA GCGCAAGGCA TGACCTTCTC CGAGGCCGGC
CCGGTGCCGG CGCAAGGCAA CATCGCTCAG CAGATCTTCT GGTACACCGC GTTTACCGCC
GACATGACCA AGCCGGGGCT GCCGGTGGTC AATGCCGACG GCACGCCGAA GTGGCGCATG
GCGCCCTCGC CCAAGGGGCC ATACTGGGAG GAGGGAATGA AGCTGGGCTA TCAGGACACA
GGGTCCTGGA CCTTCTTCAA ATCCACCCCC GAGAAGCAGC GCCTGGCCGC TTGGCTGTAC
GCCCAGTTCG TCACCTCCAA GACCGTGTCT CTGAAAAAGA CCATCGTTGG CCTGACGCCG
ATCCGCGAAT CGGACATCAA CTCCCAGGCC ATGACCGACC TTGCGCCCAA GCTTGGCGGG
CTGGTGGAGT TCTATCGCAG CCCGGCACGA GTGCAATGGA CCCCGACCGG TACCAACGTG
CCGGACTATC CTCGGCTGGC ACAGCTGTGG TGGAGCCATA TCGCCGAAGT GGCCAGTGGC
GAGAAAACGC CGCAAGAGGC GCTGGATGGC CTGGCCCGGG ATCAGGACCG TATGATGGAG
CGGCTGCAGC GGTCCAATGC CCAGGCTACC TGCGCGCCTA AGCTGAACCC TGAAAAAGAC
GCACAGTACT GGTTCGATCA GCCGGGGGCG CCAAAGCCGA AACTGGCCAA CGAAAAGCCC
AAGGGCGAAA CGGTCAGCTA TGACGAGCTG CTGAAATCGT GGGAGGCGGC GCGCAAGTGA
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| Protein sequence | MFHNKHNRRH LTLAAMLVLA GVHGAAWADQ YEDAASKWIG SEFKPSTLTP EQQLAELKWF
IKAAEPFRGM KINVVSETIT THEYESKVLA KAFSEITGIQ LTHDLLQEGD VVEKLQTQMQ
SDKNIYDGWV NDSDLIGTHF RYGKVESITD LMANEGKDYT SPTLDLKDFI GISFTTAPDG
KVYQLPDQQF ANLYWFRADW FERPELKARF KEKYGYELGV PVNWSAYEDI AKFFTEDVKE
IDGKRVYGHM DYGKKDPSLG WRFTDAWFSM AGGGDKGLPN GLPVDEWGIR VEDCHPVGSS
VTRGGDTNGP AAVYATQKYV DWMRAYAPKE AQGMTFSEAG PVPAQGNIAQ QIFWYTAFTA
DMTKPGLPVV NADGTPKWRM APSPKGPYWE EGMKLGYQDT GSWTFFKSTP EKQRLAAWLY
AQFVTSKTVS LKKTIVGLTP IRESDINSQA MTDLAPKLGG LVEFYRSPAR VQWTPTGTNV
PDYPRLAQLW WSHIAEVASG EKTPQEALDG LARDQDRMME RLQRSNAQAT CAPKLNPEKD
AQYWFDQPGA PKPKLANEKP KGETVSYDEL LKSWEAARK
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