Gene PputW619_1734 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_1734 
Symbol 
ID6110680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp1930374 
End bp1931471 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content64% 
IMG OID641621525 
ProductABC transporter related 
Protein accessionYP_001748607 
Protein GI170720919 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.712838 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.481204 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAAA TCCGCCTGCG CCAACTGGCG CACAGCTATA GCCGACAACC CGCCACCGAG 
GGCGACTACG CACTGCATCA ACTGGAGCAC GTGTGGGAGC AGGGCGGTGC CTATGCTTTG
CTCGGGCCTT CCGGGTGTGG CAAGTCGACC TTGCTGAACA TCATCTCTGG GCTGCTCACG
CCGTCCCATG GCCAGGTGCT GTTCGACGGC AAGCCGGTCA ATGACCTTTC GCCGCAGCAG
CGCAACATTG CCCAGGTGTT TCAGTTCCCG GTGGTGTACG ACACCATGAC GGTGTTCGAC
AACCTGGCGT TCCCTTTACG CAACCAGGGC CTGGACGAAG GCAGGGTGCG CACGCGGGTC
GAGGAAATCG CCGAAGTGCT CGACCTGGGC GCAGTGCTGA AGAAAAAGGC GCGCAACCTC
AGCGCTGACG AAAAGCAGAA GGTGTCCATG GGCCGTGGCC TGGTGCGCGA TGACGTCTCG
GCCATTCTTT TCGACGAGCC GTTGACGGTG ATCGACCCGC ACCTGAAATG GAAGTTGCGG
CGCAAGCTCA AGCAGATCCA TGAGCAGTTC AACATCACCA TGATCTACGT GACCCACGAT
CAACTGGAGG CTTCGACCTT CGCCGACAAG ATCGCGGTGA TGCATGGCGG GCGCATCGTC
CAGTTCGGCA CCCCGCGTGA GCTGTTCGAG CGGCCACGGC ATACCTTTGT CGGCTACTTC
ATCGGCAGCC CGGGGATGAA CCTGATCGAC GTGCGCGCCG ACGTGGCGGG GGTAGTGTTC
GGCGATGTGC ACCTGGCACT TCCCGAAGGC CTGCACGAAC GCCTGGCGGC GACGAGCGGC
GGGCGCCTGC AAGTGGGCAT TCGCCCGGAG TTCGTGCAGC TGTGGGACAG CCCGTTCGAG
GGCGCCTTGG CTGCGCAAGT GCTGGACGTT GAGGACCTGG GTACCTACCG CATCGTCACC
CTGCTGCTTG GCGGCGTGTC GCTCAAGGCG CGCCTGGCAG AAGATCGCCC GGTGCCGGTG
GCACATGCCT GGGTCAGCCT GCCGACGCAG TGGCTGCTGC TGTACGTCGA CGATGTGCTG
CTGGAGGCCG TGCCATGA
 
Protein sequence
MAEIRLRQLA HSYSRQPATE GDYALHQLEH VWEQGGAYAL LGPSGCGKST LLNIISGLLT 
PSHGQVLFDG KPVNDLSPQQ RNIAQVFQFP VVYDTMTVFD NLAFPLRNQG LDEGRVRTRV
EEIAEVLDLG AVLKKKARNL SADEKQKVSM GRGLVRDDVS AILFDEPLTV IDPHLKWKLR
RKLKQIHEQF NITMIYVTHD QLEASTFADK IAVMHGGRIV QFGTPRELFE RPRHTFVGYF
IGSPGMNLID VRADVAGVVF GDVHLALPEG LHERLAATSG GRLQVGIRPE FVQLWDSPFE
GALAAQVLDV EDLGTYRIVT LLLGGVSLKA RLAEDRPVPV AHAWVSLPTQ WLLLYVDDVL
LEAVP