Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1731 |
Symbol | |
ID | 6110677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 1926091 |
End bp | 1927155 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641621522 |
Product | ornithine cyclodeaminase |
Protein accession | YP_001748604 |
Protein GI | 170720916 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.734503 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCGCT TCATCGATGT GCAAGACCTC GCCCGCCTGG TCAACCGCAA AGGCCTGGCC ACCTGCCTGG TGGAGATGGC CGAGTACATC CGTCAGGACT ACCTGCGCTG GGACGATTTC GAGAAGTGCC CGCGCCTGGC CAATCATTCG GCGGACGGCG TGATCGAACT GATGCCGGTT TCCGACTCCA GCCGGTATGC CTTCAAGTAT GTCAACGGCC ACCCGAAGAA CACCCGCCTC GGCCTGCCCA CGGTGATGGC CTTCGGCGCC TTGAGCGACG TCGGCTCCGG CGCGCCGCTG TTGCTCAGCG AGATGACCCT GACCACAGCG ATGCGTACCG CCGCCACCTC GGCCCTCGCC GCCCGCTACC TGGCGCGTGA AGACAGCCGC AGCATGGCGC TGATCGGCAA CGGTTCGCAA AGCGAATTCC AGGCCATCGC CTTCAAGACC TTGCTGGGCA TCGACGAGAT CCGCCTGTTC GACATCGACC CTGCAGCCAC GGCGAAGCTG GTGGCCAACC TGGCGGGCCG CCCAGGGCTC AAGGTAATCG TCGCCCACAG CGTCGCCGAA GCCGTGCGCG GTGCCGATAT CGTCACCACG GTCACGGCGG ACAAGACGTA CGCGACCATC CTCACGCCGG ACATGATCGA ACCGGGCGTG CACCTGAACG CCGTGGGCGG CGACTGCCCG GGCAAGACCG AGCTGCACCG CGACATCGTC GAGCGGGCCC GGGTGATCGT TGAGTACGAG CCGCAAAGCC GGGTCGAAGG CGAAATCCAG CAAATGCCCG CCGATTCGCC GGTCTTCGCT TTCTGGCAGG TGGTCGCAGG CCTTGTTCAA GGCCGTGAAA ATGCCGATCA GGTGACCCTG TTCGATTCGG TAGGTTTTGC GTTGGAAGAT TATTCGGCGC TGCGCTATGT GCTCGATACA GCGCTCACGT TAGGGATCGG CCAGGATATC GGGCTGGTGC CGGCTCTGGA AAACCCCAAG GACTTGTATG CACTGCTGCA ACCTCGGGTG GTGGCGGTTC GTTCAGTGCA CCGGGCCGGC AGCGCCTGCG CCTGA
|
Protein sequence | MTRFIDVQDL ARLVNRKGLA TCLVEMAEYI RQDYLRWDDF EKCPRLANHS ADGVIELMPV SDSSRYAFKY VNGHPKNTRL GLPTVMAFGA LSDVGSGAPL LLSEMTLTTA MRTAATSALA ARYLAREDSR SMALIGNGSQ SEFQAIAFKT LLGIDEIRLF DIDPAATAKL VANLAGRPGL KVIVAHSVAE AVRGADIVTT VTADKTYATI LTPDMIEPGV HLNAVGGDCP GKTELHRDIV ERARVIVEYE PQSRVEGEIQ QMPADSPVFA FWQVVAGLVQ GRENADQVTL FDSVGFALED YSALRYVLDT ALTLGIGQDI GLVPALENPK DLYALLQPRV VAVRSVHRAG SACA
|
| |