Gene PputW619_1725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_1725 
Symbol 
ID6110671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp1920877 
End bp1921305 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content60% 
IMG OID641621516 
Producttransmembrane pair domain-containing protein 
Protein accessionYP_001748598 
Protein GI170720910 
COG category[S] Function unknown 
COG ID[COG4125] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.321201 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGGGAC TGAAACGCAA ACTGGTCTAC GTGACTTTCT ACGAGCTGAT TGGCTTGTGC 
ATGTCGACGC TGGGGCTGGC TTATTTGTCC GATACCCAGG CTTCGCATAC TGGGCCGCTG
GCGGTGATGA TCACCACCAT CGCCATGCTC TGGAACCTGA TTTACAACAG CCTGTTCGAG
TATTGGGAGA GCCGCCAGGC CAAGCGCGGC CGCAGCGTGG CGCGGCGGGT GGTGCATGCT
GTCGGTTTCC AGCTGACCCT GGTTGTGTAC CTGATCCCGC TGATTGCCTG GTGGCTGGGG
ATGAGCCTGG TCGAGGCGTT CCTGGTGGAC CTTGCCTTTA TCATCCTGGT GCCTTGCTAC
ACCTTTGCCT ACAACTGGGC GTTTGACCGG ATATTCGGGT TGCCGGCATC GGCCATGGCC
ACCGCCTGA
 
Protein sequence
MQGLKRKLVY VTFYELIGLC MSTLGLAYLS DTQASHTGPL AVMITTIAML WNLIYNSLFE 
YWESRQAKRG RSVARRVVHA VGFQLTLVVY LIPLIAWWLG MSLVEAFLVD LAFIILVPCY
TFAYNWAFDR IFGLPASAMA TA