| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1708 |
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| Symbol | |
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| ID | 6110654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 1899479 |
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| End bp | 1902358 |
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| Gene Length | 2880 bp |
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| Protein Length | 959 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641621499 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_001748581 |
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| Protein GI | 170720893 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCAATT ACTTTGACCC CGAGACCGAT CTGGGCACCC CTGAACGCCA CGGTGATGTG
CAGATCAGTC TGAATATCGA CGGGCGCAGC GTTAGCGTGC CGGCGGGCAC CTCAGTGATG
CGCGCCGCCG CCATGCTCGG CACCACCATC CCCAAATTGT GCGCCACCGA CAGCCTGGAG
GCCTTCGGCT CCTGCCGCAT GTGCATGGTC GAAATCGATG GCATGCGCGG ATACCCGGCG
TCCTGCACCA CGCCTGTGAG CGAAGGCATG GTGGTGCGCA CGCAGACGCC ACGTCTGGCC
GACCTGCGTC GCAATGTCAT GGAGCTGTAT ATTTCCGACC ACCCGCTCGA CTGCCTGACC
TGCTCGGCCA ATGGCAACTG CGAACTGCAG ACGGTCGCCG GCCAGGTCGG TCTGCGCGAG
GTGCGCTACG GCTATGACGG CGCCAATCAT CTGGCTGAGC AGAAGGACGT ATCCAACCCG
TACTTCGATT ACGAGCCCAG CAAGTGCATC GTCTGCAGCC GCTGCGTGCG TGCCTGTGAG
GACATCCAGG GCACGTTCGC CCTGACCATC ACCGGGCGCG GCTTCGAGTC GCGGGTGGCG
GCAGCCGGTG GTGACAACTT CCTCACCTCC GAATGCGTGT CGTGCGGCGC CTGCGTGCAG
GCCTGCCCGA CGGCCACCCT GACCGAAAAA AGCCTGGTGC AGATCGGACA GCCGGAACGA
GCGGTGATCA CTACCTGCGC CTACTGCGGC GTGGGCTGCT CGTTCCGTGC GGAAATGAAG
GGCGACCAGT TGGTACGTAT GGTCCCCGAC AAGAACGGCG GCGCCAACCA CGGCCATGCC
TGCGTCAAGG GCCGCTTCGC CTGGGGCTAT GCCACCCACC CTGACCGCAT CACTAAACCG
ATGATCCGCA AGCATCTGGA TGACCCTTGG CAAGAAGTCA GCTGGGACGA GGCCGTCGCC
TACGCGGCCA ACGAGTTCCG GCGCATCCAG CTCAAGTACG GGCGCGACTC TATCGGTGGC
ATCACCTCCA GCCGTTGCAC CAACGAAGAA GCCTACCTGG TGCAGAAGCT GGTGCGCACG
GCGTTCGGCA ACAACAACGT GGATACCTGC GCTCGGGTTT GCCATTCGCC CACCGGCTAT
GGCCTCAAGC AGACCCTTGG CGAGTCGGCG GGTACCCAGA GTTTCGATTC GGTGATGCAG
GCCGACGTGA TCCTGGTGAT CGGTGCCAAC CCCACCGATG CCCACCCGGT ATTCGGTTCG
CAGCTCAAAC GCCGCCTGCG CCAGGGCGCG CGGCTGATCG TCATCGACCC GCGGCGCATC
GACCTGGTGG ATTCGCCCCA CGCCCGTGCC GAGCTGCACT TGCAACTGCG CCCGGGCACC
AACGTGGCCA TGCTCAACGC CTTGGCCCAT GTGATCGTTA GCGAGGGGCT GCTGGCCCAG
CGCTTCATCG ACGAGCGCTG CGAGAGCGAG GCCTTCGCCC GCTGGCGCGA CTTCGTCAGC
CTCGCGCAAA ACGCCCCTGA AGTGCAGGGC CCCGTGTGCG GCGTGCCCGC CGAGCAGATC
CGCGCCGCCG CCCGGCTGTA TGCCACAGGC GGCAACGCGG CGATCTACTA CGGCCTGGGC
GTGACTGAAC ACAGCCAGGG CAGCACGGCG GTTATGGGCA TCGCCAACCT GGCAATGGCC
ACCGGCAATA TTGGCCGCGA AGGGGTAGGG GTAAACCCCC TGCGTGGGCA GAACAACGTG
CAGGGCTCGT GCGACATGGG TTCGTTCCCG CATGAGCTGC CAGGCTACCG GCATATCTCC
AACGAGGCCG TGCGTGCCGA GTTCGAGCAG GCCTGGGGCG TAACCCTGCA GCCCGACCCG
GGCCTGCGCA TCCCCAACAT GTTCGAAGCG GCGCTGGACG GCAGCTTCAA GGCGCTTTAC
TGCCAGGGTG AGGACATCGC CCAGAGCGAC CCCAACACCC AGCACGTCAC TGCAGCGCTG
CGGGCCATGG AATGCGTGGT GGTGCAGGAC ATCTTCCTCA ACGAGACGGC CAAGTTCGCC
CATGTGTTCT TGCCGGGCAG CTCGTTCCTG GAAAAGGACG GCACCTTCAC CAACGCCGAG
CGCCGCATTT CGCGGGTACG CAAGGTGATG CAGCCGCTGG CCGGCAAGGC TGACTGGGAG
GCCACCGTGG CCTTGGCCAA CGCCTTGGGC TACCCGATGA GCTACCGCCA CCCGTCCGAG
ATCATGGACG AAATCGCCCG CCTGACACCA ACCTTTCACC GCGTCAGCTA CGCCGAAATC
GACCGCCATG GCAGCCTGCA GTGGCCGTGC AACGACGCAG CCCCCGACGG CACGCCGACC
ATGCACATCG ATCAGTTCGT GCGGGGCAAA GGGCGCTTCA TGCTCACCGG CTATGTGCCC
ACCGACGAGA AGGTCAACAG CCGCTACCCA CTGCTGCTGA CCACCGGGCG CATTCTCAGC
CAGTACAACG TCGGCGCCCA GACCCGGCGC ACCGCCAACG TCGCCTGGCA TGCTGCTGAC
TGCCTGGAGC TGCACCCCAC CGACGCCGAA AGCCGCGGCA TTCATGATGG CGACTGGGTC
GGCATCGGCA GCCGTGCAGG GCAGACGGTA CTGCGCGCCA AAATAAGTGA GCGCGTGGCG
CCGGGGGTGG TGTACACCAC CTTCCACTTC CCCGAGTCCG GCGCCAACGT GATCACCACA
GACAATTCCG ACTGGGCCAC CAACTGCCCG GAGTACAAGG TCACGGCGGT GGAGGTGGTC
AAGGTGTTCC ACCCGTCGCA GTGGCAAAAG CGCTACCAGG ACTTCAGTGA TGAACAGCGG
CGCCTGCTCA AGGAACGTCG CACGGCCGAC AAACCCGAAC AGGCCGAGGT ACGCCGATGA
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| Protein sequence | MINYFDPETD LGTPERHGDV QISLNIDGRS VSVPAGTSVM RAAAMLGTTI PKLCATDSLE
AFGSCRMCMV EIDGMRGYPA SCTTPVSEGM VVRTQTPRLA DLRRNVMELY ISDHPLDCLT
CSANGNCELQ TVAGQVGLRE VRYGYDGANH LAEQKDVSNP YFDYEPSKCI VCSRCVRACE
DIQGTFALTI TGRGFESRVA AAGGDNFLTS ECVSCGACVQ ACPTATLTEK SLVQIGQPER
AVITTCAYCG VGCSFRAEMK GDQLVRMVPD KNGGANHGHA CVKGRFAWGY ATHPDRITKP
MIRKHLDDPW QEVSWDEAVA YAANEFRRIQ LKYGRDSIGG ITSSRCTNEE AYLVQKLVRT
AFGNNNVDTC ARVCHSPTGY GLKQTLGESA GTQSFDSVMQ ADVILVIGAN PTDAHPVFGS
QLKRRLRQGA RLIVIDPRRI DLVDSPHARA ELHLQLRPGT NVAMLNALAH VIVSEGLLAQ
RFIDERCESE AFARWRDFVS LAQNAPEVQG PVCGVPAEQI RAAARLYATG GNAAIYYGLG
VTEHSQGSTA VMGIANLAMA TGNIGREGVG VNPLRGQNNV QGSCDMGSFP HELPGYRHIS
NEAVRAEFEQ AWGVTLQPDP GLRIPNMFEA ALDGSFKALY CQGEDIAQSD PNTQHVTAAL
RAMECVVVQD IFLNETAKFA HVFLPGSSFL EKDGTFTNAE RRISRVRKVM QPLAGKADWE
ATVALANALG YPMSYRHPSE IMDEIARLTP TFHRVSYAEI DRHGSLQWPC NDAAPDGTPT
MHIDQFVRGK GRFMLTGYVP TDEKVNSRYP LLLTTGRILS QYNVGAQTRR TANVAWHAAD
CLELHPTDAE SRGIHDGDWV GIGSRAGQTV LRAKISERVA PGVVYTTFHF PESGANVITT
DNSDWATNCP EYKVTAVEVV KVFHPSQWQK RYQDFSDEQR RLLKERRTAD KPEQAEVRR
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