| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1686 |
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| Symbol | |
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| ID | 6110632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 1873820 |
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| End bp | 1874785 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641621478 |
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| Product | tRNA-dihydrouridine synthase A |
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| Protein accession | YP_001748560 |
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| Protein GI | 170720872 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.902127 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGTA AATTTAGTGT AGCCCCGATG ATGGACTGGA CCGACCGCCA CTGCCGGTTC
TTCCTGCGCC TGCTCTCCAG GCACACCCTG CTCTACACCG AAATGGTCAC CACTGGCGCC
CTGCTGCACA ACGACGCGCA CCGTTTCCTG CGCCACGATG TGTCCGAGCA TCCGCTTGCC
CTGCAGCTGG GCGGTAGTGT GCCGGCCGAC CTGGCGGCCT GTGCGCGCCT GGCCGAACAA
GCGGGCTATG ACGAGGTGAA CCTCAACGTC GGCTGCCCGA GCGACCGGGT GCAGAACAAC
ATGATCGGCG CTTGCCTCAT GGCCCACCCG GCGCTGGTGG CCGATTGTGT CAAGGCCATG
CGTGATGCGG TGTCGACGCC GGTGACGGTG AAGCACCGTA TTGGTATCAA TGGCCGTGAC
AGCTATGCCG AGCTGTGCGA CTTCGTCGGG CAGGTACGTG ACGCCGGGTG CCGCAGTTTC
ACCGTGCATG CGCGCATCGC GATTCTCGAA GGGCTGTCGC CGAAAGAGAA CCGCGAGATC
CCGCCGCTGC GGTACGACGT GGCTGCGCAG TTGAAAGCAG ATTTCCCGGA CCTTGAGATT
GTACTCAATG GCGGGATCAA GACCTTGGAG GAATCTAAGG CGCACCTGGA GACCTTCGAT
GGGGTGATGC TGGGCCGCGA GGCTTACCAC AATCCGTATG TGCTGGCTGA GGTGGATCAG
GTGCTGTTTG GCAGTAATGC GCCGGTGGTC AGCCGTAGCG AGGCGATGGC CAAGCTGCGG
CCTTATATCG TGGCGCACAT TGAAAGCGGG GGCGCAATGC ACCACGTCAC CCGGCACATT
CTGGGGCTGG GCCAGGGGTT CAAGGGGGCG CGGCGGTTCC GGCAGTTGCT TTCGGCGGAC
ATTCACAAGG CGCCGGAGCC ACTGGTGGTG TTCGACCAGG CCGCGGAGCT GTTGCAGGGG
CGGTGA
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| Protein sequence | MNRKFSVAPM MDWTDRHCRF FLRLLSRHTL LYTEMVTTGA LLHNDAHRFL RHDVSEHPLA
LQLGGSVPAD LAACARLAEQ AGYDEVNLNV GCPSDRVQNN MIGACLMAHP ALVADCVKAM
RDAVSTPVTV KHRIGINGRD SYAELCDFVG QVRDAGCRSF TVHARIAILE GLSPKENREI
PPLRYDVAAQ LKADFPDLEI VLNGGIKTLE ESKAHLETFD GVMLGREAYH NPYVLAEVDQ
VLFGSNAPVV SRSEAMAKLR PYIVAHIESG GAMHHVTRHI LGLGQGFKGA RRFRQLLSAD
IHKAPEPLVV FDQAAELLQG R
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