Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1685 |
Symbol | |
ID | 6110631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 1872661 |
End bp | 1873587 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641621477 |
Product | transaldolase B |
Protein accession | YP_001748559 |
Protein GI | 170720871 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0176] Transaldolase |
TIGRFAM ID | [TIGR00874] transaldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTCCA AGCTGGAACA ACTCAAGCAG TTCACCACCG TGGTCGCCGA CACCGGGGAT CTGGACGCCA TCACCCGCCT CAAGCCGGTC GATGCCACCA CCAACCCCTC GTTGCTGCTA AAGGCTGCCG CTATCCCGGG TTATGCCGAC CTGCTCAAGC AGGTAAAAAG CGATGCCAAG GGCAATGTCG ACCTGGCGTG CGACAAGTTC GCGGTGGCGG TGGGCGCTGG CATTCTGAAA GTGATCCCTG GGCGCATCTC CACCGAAGTG GATGCGCGCC TGTCGTTCGA CGAACCGGCA CTGCTGAGCA AGGCCCGCCA GCTGATCGAG CTTTACCAGG CCGCCGGGAT TCCCAAAGAC CGCGTGCTGA TCAAGCTGGC CTCCACCTGG GAAGGCATCC GCGCCGCCGA GCAGTTGGAG AAGGAAGGCA TCCAGACCAA CCTGACCCTG CTGTTCTCCT TCGCCCAGGC CCAGGCCTGC GCCGATGCCG GTGTGTTCCT GATTTCGCCG TTCGTGGGCC GGATCTACGA TTGGTACAAG AAAAGCACCG GCCAGGAGTA CGTGGGTGCC AATGACCCGG GCGTACAGTC GGTCACACGC ATCTACAACT ACTACAAGGC CAACGGCTAC AACACCGTGG TCATGGGCGC CAGCTTCCGC AACATTGGCC AGATCGAACA ACTGGCTGGC TGCGATCGCC TGACCATCAG CCCGGAGCTG CTGCAGCAAC TGAGCGATGA CCAGGGCGAG CTGCCGCAGG TGCTAAAGCC GGGCGATGCC GGCGAGGCCA AGCAGGTGCT CAGCGAAAGC CAGTTCCGCT GGGCCATGAA CGAAGACGCC ATGGGCACCG AGAAACTGGC CGAGGGCATT CGCCAGTTCG CCCGTGACCA GGAGAAGCTG GAAAAGCTGA TGGCTGACAA AGCCTGA
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Protein sequence | MTSKLEQLKQ FTTVVADTGD LDAITRLKPV DATTNPSLLL KAAAIPGYAD LLKQVKSDAK GNVDLACDKF AVAVGAGILK VIPGRISTEV DARLSFDEPA LLSKARQLIE LYQAAGIPKD RVLIKLASTW EGIRAAEQLE KEGIQTNLTL LFSFAQAQAC ADAGVFLISP FVGRIYDWYK KSTGQEYVGA NDPGVQSVTR IYNYYKANGY NTVVMGASFR NIGQIEQLAG CDRLTISPEL LQQLSDDQGE LPQVLKPGDA GEAKQVLSES QFRWAMNEDA MGTEKLAEGI RQFARDQEKL EKLMADKA
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