| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1684 |
|---|
| Symbol | |
|---|
| ID | 6110630 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 1870658 |
|---|
| End bp | 1872517 |
|---|
| Gene Length | 1860 bp |
|---|
| Protein Length | 619 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641621476 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001748558 |
|---|
| Protein GI | 170720870 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTTCCT CCCCTTTGCC CCTTGTTCTC GCCGGCCCTG TACTGCGCCG CCTGGAGCCT
CAGCGCCTGG CCATCTGGCT GGTCGGCAGC CAACCCTTGC AGCCCGAGTT CACCCTGGAC
GGCGCGGCCA AGGTGGATTG CCAGGTCGTA CCGATCGGCC AGCACGCCTT CATTCATCTG
CTGGACATCC ACTTTGCCCA ACCGCTGCCC AGCAACGTCG AACTCGAATA CGACCTGCTG
ATCAACGGCC AAGGTATCGC TGGCTGGGCG CCGCACCTGC TCTACCCAGG GCGCCGGCGC
CCGAGCCTGG TGCTGCGCGA CCGCCTGGAC CAGCTACTGC ACGGCTCTTG CCGCAAGCCG
CACCACCCCG CTGCCGATGG CCTGCTTTGC GCCGACCGGC TGCTGCAGGC CTGTACGCGC
CCCGAAGAGC GCCCGGCCGT GCTGCTGATG ACCGGCGACC AAGTCTACGC CGATGATGTA
GCAGGGCCGA TGCTACGGGC CATTCATTCG CTGATCGAGC GCCTTGGCCT GTTCGATGAA
CACCTGGACG GCGCGGTCGT GGCCGACAGC AGGTCGCTCT ATGACCACCC GGCCAGCTAT
TACCACCGCG CCGACTTGCT GCCGGCCCAG GAACGCAACG AAACCCTGCG CGAGCGATTC
TTCGGCGGCA AGCGCAAACC GATCTTCTCC TCAAGCAATG CCGACAACCA TCTGGTGACG
TTCGCCGAGG TCATGGCCAT GTACCTGCTG GTCTGGTCAC CAACACCTTG GCAACTGGTA
GAGCTCGAGA TGCCTGCGGG CCTTGCCGAC CCGCACCAGG CGCGCTACCG CAAGGAACTG
CCGCTGGTGC AGACGTTCGC CGACAACCTG GGCCAGGTGG CCCGGGTAAT GGCGCATTTG
CCTTGCCTGA TGATCTTCGA CGACCACGAC ATCACCGATG ACTGGAACCT CTCGGCGCAG
TGGGAGGAAA CAGCCTACGG CCACCCATTC TCGCGACGAA TCATCGGCAA TGCCCTCCTC
GGCTACCTGC TGTGCCAGGC CTGGGGCAAC GACCCGCAAG GCTGCAAGGC AATGGTCGGG
CAATGCCAGG CACTAGCTAG CCCACAACTG GACAGCCAGC AACAGGACCA CCTGATCGGT
GAGCTGCTGC GCTTTCAGGG CTGGCAGTTC AGCCTGCCCA GCAACCCGCC CCTTCTGGTA
CTGGACACCC GCACACGCCG CTGGCGCAGC GAAAGCGACT TGGCCAAACC CTCCGGCCTG
CTCGACTGGG AGGCGTTGAG CGAACTGCAG CAAGCCTTGC TGGACCACCC TTCGGCGATC
ATCGTGTCAC CGGCGCCGAT CTTTGGTGTC AAGCTGATCG AGACGGTGCA GAAAGTGTTC
AGCTGGCTGG GCCACCCGCT GCTGGTAGAT GCCGAGAACT GGATGGCCCA CCGCGGTGCC
GCCCAGGTGA TCCTGAATAT CTTCCGCCAC TCGCGCACGC CGGGGCACTA CGTGATCCTG
TCAGGGGACG TGCATTATTC GTTCGTGTAC GAGGTGCTGA TTCGCCATCG CCAGCGCAGC
CCGCACCTAT GGCAGGTCAC CAGCAGCGGG ATCAAGAATG AGTTCCCTCG CCGCTTGCTG
GACGTGCTGG ACCGGCTCAA CCGCTGGCTC TACTCGCCGC GCTCGCCGCT GAACTGGTTC
ACCCGGCGGC GGGAGATGGA AGTGGTGCCG CGCACACCCA GCCACAGCAA GGCCGGGGAA
AGGCTATGGA ATGGTGCGGG GCTGGGGCAG GTATTTTTCG ATGAACAGGG GCGCCCGGCA
CGGGTGTTTC AGCTGGATGC AAAGGGGGGT GAAGCTACGG AGTTTGCCCG GCCGAACTAG
|
|---|
| Protein sequence | MTSSPLPLVL AGPVLRRLEP QRLAIWLVGS QPLQPEFTLD GAAKVDCQVV PIGQHAFIHL
LDIHFAQPLP SNVELEYDLL INGQGIAGWA PHLLYPGRRR PSLVLRDRLD QLLHGSCRKP
HHPAADGLLC ADRLLQACTR PEERPAVLLM TGDQVYADDV AGPMLRAIHS LIERLGLFDE
HLDGAVVADS RSLYDHPASY YHRADLLPAQ ERNETLRERF FGGKRKPIFS SSNADNHLVT
FAEVMAMYLL VWSPTPWQLV ELEMPAGLAD PHQARYRKEL PLVQTFADNL GQVARVMAHL
PCLMIFDDHD ITDDWNLSAQ WEETAYGHPF SRRIIGNALL GYLLCQAWGN DPQGCKAMVG
QCQALASPQL DSQQQDHLIG ELLRFQGWQF SLPSNPPLLV LDTRTRRWRS ESDLAKPSGL
LDWEALSELQ QALLDHPSAI IVSPAPIFGV KLIETVQKVF SWLGHPLLVD AENWMAHRGA
AQVILNIFRH SRTPGHYVIL SGDVHYSFVY EVLIRHRQRS PHLWQVTSSG IKNEFPRRLL
DVLDRLNRWL YSPRSPLNWF TRRREMEVVP RTPSHSKAGE RLWNGAGLGQ VFFDEQGRPA
RVFQLDAKGG EATEFARPN
|
|---|
| |