Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1683 |
Symbol | |
ID | 6110629 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 1870123 |
End bp | 1870605 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641621475 |
Product | anti-sigma-factor antagonist |
Protein accession | YP_001748557 |
Protein GI | 170720869 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTACCG GTAGAATCCA GTTCGCCGAG CAAAGCGGTA CCTTCGTGCT GAAATTCGTC GGTGAAGTGC GCCTGACCTT GTGTTCGGCG CTGGATGCGA CGATCGAGAA AATATTCACC GCGCTGAATT TCTCGGCCAT CGTCATCGAC CTCACCGAGA CCGAGAGCAT AGACAGCACC ACGCTGGGCC TGCTGGCCAA GCTGTCGATC CTGTCGCGGC AAAAGGTCGG CCTGCTGCCG ACCGTGGTCA CCACCAACCC GGATATTTCG CGCCTGCTGC AGTCGATGGG CTTCGATCAG GTGTTCAACA TCGTCGATCG CCCGGTGCCG TGCCCGGAAT GCCTGACCGA CCTGCCATCC CAGGACCAGA ACGAAGATGT GGTGCGCTCC AAGGTGCTGG AGGCGCACAA GATTCTGATG GGCCTGAATG ACTCCAACCG TGAAGCCTTC CATGACCTGG TGAATGCGCT GGAGCGCTCC TGA
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Protein sequence | MSTGRIQFAE QSGTFVLKFV GEVRLTLCSA LDATIEKIFT ALNFSAIVID LTETESIDST TLGLLAKLSI LSRQKVGLLP TVVTTNPDIS RLLQSMGFDQ VFNIVDRPVP CPECLTDLPS QDQNEDVVRS KVLEAHKILM GLNDSNREAF HDLVNALERS
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