Gene PputW619_1683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_1683 
Symbol 
ID6110629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp1870123 
End bp1870605 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content59% 
IMG OID641621475 
Productanti-sigma-factor antagonist 
Protein accessionYP_001748557 
Protein GI170720869 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACCG GTAGAATCCA GTTCGCCGAG CAAAGCGGTA CCTTCGTGCT GAAATTCGTC 
GGTGAAGTGC GCCTGACCTT GTGTTCGGCG CTGGATGCGA CGATCGAGAA AATATTCACC
GCGCTGAATT TCTCGGCCAT CGTCATCGAC CTCACCGAGA CCGAGAGCAT AGACAGCACC
ACGCTGGGCC TGCTGGCCAA GCTGTCGATC CTGTCGCGGC AAAAGGTCGG CCTGCTGCCG
ACCGTGGTCA CCACCAACCC GGATATTTCG CGCCTGCTGC AGTCGATGGG CTTCGATCAG
GTGTTCAACA TCGTCGATCG CCCGGTGCCG TGCCCGGAAT GCCTGACCGA CCTGCCATCC
CAGGACCAGA ACGAAGATGT GGTGCGCTCC AAGGTGCTGG AGGCGCACAA GATTCTGATG
GGCCTGAATG ACTCCAACCG TGAAGCCTTC CATGACCTGG TGAATGCGCT GGAGCGCTCC
TGA
 
Protein sequence
MSTGRIQFAE QSGTFVLKFV GEVRLTLCSA LDATIEKIFT ALNFSAIVID LTETESIDST 
TLGLLAKLSI LSRQKVGLLP TVVTTNPDIS RLLQSMGFDQ VFNIVDRPVP CPECLTDLPS
QDQNEDVVRS KVLEAHKILM GLNDSNREAF HDLVNALERS