| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1675 |
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| Symbol | |
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| ID | 6110621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 1864113 |
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| End bp | 1864793 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641621467 |
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| Product | two component heavy metal response transcriptional regulator |
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| Protein accession | YP_001748549 |
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| Protein GI | 170720861 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR01387] heavy metal response regulator |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.294903 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTGC TGATTGTCGA AGACCAGGCC CGCACCGGCC AGTACCTGAG CCAAGGCCTC
AGCGAAGCCG GCTTCGCCAC TGAGCTGGTC GCTGACGGCG AAACCGGCCA GCACCTGGCG
CTGAGCGGCG ATCACGACCT GCTGATCCTC GATGTGATGC TCCCTGGTCG CGACGGTTGG
CAGATCCTCC AGGCTGTGCG CCAGGCCGGC CTGGACACGC CGGTGCTGTT CCTCACTGCT
CGCGATGCGG TGGAGGACCG CGTGCGCGGC CTGGAACTAG GTGCCGACGA TTACCTGGTC
AAGCCTTTCG CCTTTTCCGA ACTGCTGGCC CGGGTCCGCA GCCTGCTACG CCGCGGTGCC
AGCCCCAGCC AAGAGACGCA GCTGGCCTTG GCCGACCTGC GCCTGGACTT GTTCCGCCGC
CGGGCAGAGC GCGCAGGCCA ACGCATCGAC CTGACCGCCA AGGAGTTCGC CCTGCTTGAA
TTGCTGCTGC GCCGCCAAGG CGAAGTATTG CCCAAATCGT TGATCGCCTC GCAAGTTTGG
GACATGAATT TCGACAGCGA CACCAACGTC ATCGAGGTCG CAATCCGCCG CCTGCGCCTG
AAAATCGACG ACCCGCACCG CAACAAGCTG ATTCACACCG TGCGCGGCAT GGGCTATGTG
CTCGAGGAGC GCCACGACTG A
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| Protein sequence | MKLLIVEDQA RTGQYLSQGL SEAGFATELV ADGETGQHLA LSGDHDLLIL DVMLPGRDGW
QILQAVRQAG LDTPVLFLTA RDAVEDRVRG LELGADDYLV KPFAFSELLA RVRSLLRRGA
SPSQETQLAL ADLRLDLFRR RAERAGQRID LTAKEFALLE LLLRRQGEVL PKSLIASQVW
DMNFDSDTNV IEVAIRRLRL KIDDPHRNKL IHTVRGMGYV LEERHD
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