| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1674 |
|---|
| Symbol | |
|---|
| ID | 6110620 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 1862776 |
|---|
| End bp | 1864113 |
|---|
| Gene Length | 1338 bp |
|---|
| Protein Length | 445 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641621466 |
|---|
| Product | heavy metal sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001748548 |
|---|
| Protein GI | 170720860 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR01386] heavy metal sensor kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.273968 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAGGC TTTCCCTTGG CAGCCGTCTG GCCCTGTTGT TCGCCGCGTG TACCGCTGCC
GTTTCGCTGG GGGCGGGCCT GCTGTTCAAC CGCGCCAGCG AGCAACATTT CGTTGAGCTG
GACCAGCAAC TGCTCGAATC ACGCGTGTCG CTTTTACGCA CCCGGCTTTC CGGCCTGCAA
CGCCCTGCCG ACCTGCAAGC GCAGTTGGCA GCACTGCGCA ACGAGCTCAG CCACCAGGCC
GACCTGGCCT TGCGCATCAA TGGCAGCGAT GGCAGCCCTT GGTACGCCAG CCGCTCCGCG
CTGCCAGACG CGCCGGCCGG CCCAGGGCTG GCAACGGTGC ATGCCGACGG TGTCGATTAC
CGCAGCCTGG CCGTGCGGCT GAACGACAGC GCACGACTGA CGCTGTTTCT CGACATCACC
CATCACCAGC ACTTCCTGCA GGGCATGCAA CGCCTCATCT GGCTCACCGT CGGCCTGTCC
GCGCTGGCCA CGGCACTGCT CGGCGCCTGG GCCGCGCGCC GCGGGCTAAA GCCCTTACGG
CAGATGGGCC AGGTGGCCGC CAGCGTGTCG GCGCGCTCGC TGACCACCCG TCTGCCGGTG
GCGCAGCTGC CGGAAGAACT GGCGGAACTA GGCAGCACCG TGAACGCCAT GCTGCAGCGC
CTGGATGACG CCTTCCAGCG CCTGTCAGCG TTCTCGGCCG ATATCGCCCA CGAGCTACGC
ACGCCGCTGT CAAACCTGCT GACCCACACC CAGGTCACCC TCACCCGCCC ACGTAGCCTC
GAGGAATATC GCGAAGCACT GCACGGCAAC CTTGAGGAGC TGCAGTGGAT GGCACAGATG
ATCAACGACA TGCTTTTCTT GGCCAAGGCC GACCATGGGC TGCTGGCACC AGGCCAGGCG
ATGCTGGCGT TGCATGAAGA GGTGGACGCG CTGCTGGAGT ATTACGCCCC CCTCGCCGAG
GATAACGAAG TGCAGCTGCT GCGTGAGGGT GAGGCGACGT TGAAGGGCGA CCGGCATATG
CTGCGCCGGG CACTGTCCAA CCTGCTCGAC AATGCACTGC GGTTTACGCC GGCAGGCGGG
CAAATACGCG TGACGCTGGA GCCTGGGGGT AAGGTTTGCG TGGCCAATAC CGGCAAACCG
ATCGAAGCTG CATCATTGCC TAGGCTGTTT GACCGGTTTT ATCGGGTGGA CCCAGCGCGG
CGCGAGGGCA GTAGCGAACA TGCGGGGCTG GGCCTGGCAA TCACCCGGTC GATCATCCAG
GCCCATGGCG GGAGCATCCG GGCACAGTGC AAGGACGGCT GGACGCGGTT TGTAATCAAG
TTCAGCGAGC CGCTTTAG
|
|---|
| Protein sequence | MRRLSLGSRL ALLFAACTAA VSLGAGLLFN RASEQHFVEL DQQLLESRVS LLRTRLSGLQ
RPADLQAQLA ALRNELSHQA DLALRINGSD GSPWYASRSA LPDAPAGPGL ATVHADGVDY
RSLAVRLNDS ARLTLFLDIT HHQHFLQGMQ RLIWLTVGLS ALATALLGAW AARRGLKPLR
QMGQVAASVS ARSLTTRLPV AQLPEELAEL GSTVNAMLQR LDDAFQRLSA FSADIAHELR
TPLSNLLTHT QVTLTRPRSL EEYREALHGN LEELQWMAQM INDMLFLAKA DHGLLAPGQA
MLALHEEVDA LLEYYAPLAE DNEVQLLREG EATLKGDRHM LRRALSNLLD NALRFTPAGG
QIRVTLEPGG KVCVANTGKP IEAASLPRLF DRFYRVDPAR REGSSEHAGL GLAITRSIIQ
AHGGSIRAQC KDGWTRFVIK FSEPL
|
|---|
| |