| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1660 |
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| Symbol | |
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| ID | 6110606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 1843755 |
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| End bp | 1844462 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641621452 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001748534 |
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| Protein GI | 170720846 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.903697 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.835101 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCAAT CGGAAACCGT TGAACGCATT CTCGATGCTG CCGAGCAGCT GTTCGCGGAA
AGGGGGTTCG CGGAAACCTC GTTGCGGCTG ATTACCAGCA AGGCCGGGGT CAACCTGGCG
GCGGTCAATT ACCATTTCGG GTCCAAGAAG GCGCTGATCC AGGCGGTCTT TTCCCGTTTC
CTCGGGCCGT TCTGCGCCAG CCTCGAACGT GAACTGGAGC GTCGTCAAGG TAAGCCTGAA
CAAAAGCCCA GCCTCGAAGA ACTGCTGGAA ATGCTCGTGG AACAGGCACT GGTGGTGCAG
CCGCGCAGCA ACAACGACCT GTCGATCTTC ATGCGCCTGC TGGGCCTGGC CTTCAGCCAG
AGCCAAGGGC ACCTGCGGCG CTACCTGGAA GACATGTATG GCAAGGTGTT CCGCCGCTAT
ATGTTGCTGG TCAATGAGGC CGCACCACGC ATTCCTCCGC TCGAACTGTT CTGGCGCGTG
CACTTCATGC TCGGTGCTGC GGCGTTCAGC ATGTCCGGCA TCAAGGCGTT GCGCGCCATT
GCCGAAACCG ACTTTGGTAT AAACACCTCC ATAGAGCAGG TCATGCGCCT GATGGTACCG
TTCCTGGCCG CTGGCATGCG CGCCGACAGC GGTGTCACCG ACGAGGCGAT GGCCGCAGCA
CAGTTGCGCC CGCGCAGTAA AACCGGTAGC ACCACCGCCA AGGCCTGA
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| Protein sequence | MAQSETVERI LDAAEQLFAE RGFAETSLRL ITSKAGVNLA AVNYHFGSKK ALIQAVFSRF
LGPFCASLER ELERRQGKPE QKPSLEELLE MLVEQALVVQ PRSNNDLSIF MRLLGLAFSQ
SQGHLRRYLE DMYGKVFRRY MLLVNEAAPR IPPLELFWRV HFMLGAAAFS MSGIKALRAI
AETDFGINTS IEQVMRLMVP FLAAGMRADS GVTDEAMAAA QLRPRSKTGS TTAKA
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