Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1650 |
Symbol | |
ID | 6110596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 1833603 |
End bp | 1834043 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641621442 |
Product | UspA domain-containing protein |
Protein accession | YP_001748524 |
Protein GI | 170720836 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.779795 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTACG AACATCTTCT GGTCGCCGTC GACCTCACCG AAGAGTGCGA CCCGGTGATC AAGCGTGCCA TGAAGCTCGC CGAGCCCACA GGCGCCAAGG TCTCGCTGGT GCATATCGTC GAACCCATGG CCATGGCATT TGGCGGTGAC GTGCCAATGG ACCTGTCGCA GCTGCAACAG CAACAGTTCG ATCAGGCCAA GGAGCGCATG GAACGCCTGT TCAACAAGTA CCCCGAGATC AACCGCGGTG ATTCTCACCT GACCTATGGC CAACCGCGCC AAGAGATCCA CCAGTTGGCC AAGGAGCAGA ACTGCGATCT GATCGTGGTT GGCAGCCATG GCCGCCATGG CCTGGCATTG CTGCTGGGCT CAACGGCCAA TGACGTGCTG CATGGCGCGC CGTGCGATGT ACTGGCGGTG CGGTTGCAGA AGAAAGAATG A
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Protein sequence | MPYEHLLVAV DLTEECDPVI KRAMKLAEPT GAKVSLVHIV EPMAMAFGGD VPMDLSQLQQ QQFDQAKERM ERLFNKYPEI NRGDSHLTYG QPRQEIHQLA KEQNCDLIVV GSHGRHGLAL LLGSTANDVL HGAPCDVLAV RLQKKE
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