| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1629 |
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| Symbol | |
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| ID | 6110574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 1806770 |
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| End bp | 1807654 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641621420 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001748503 |
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| Protein GI | 170720815 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.876181 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.456368 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACGC CTTTCGACCC CGCCCGCCAG CAAGCCAGCA CGGTTTGCCT GCCACCTGGC
AACTGGGCGA CGGTACTTGA TTGCCTGTGC GATCATTTCA AGGCAATCGA GCGTGCGCAA
TGGCTTGACC GCTTTGCTCG TGGCCGGGTG CTCAACGCCG AAGGCCAGGC GATTGCTGCC
GACCTGCCTT ACCGCCGCGG CATGCGTTTG CACTACTTTC GTGAGGTGCC CAACGAGCGG
CCGATCCCGG TAGAGGAAGC CATCCTGCAT GTGGATGAGC ATCTGGTGGT GGCCGACAAA
CCGCATTTTC TGCCGGTTAC GCCAACCGGC GAGTATGTCG AACAGACCTT GCTGCGCCGT
TTGATCCGGC GCCTGGATAA CCCTCACCTG GTGCCGTTGC ACCGCATTGA TCGCCATACC
GCAGGGCTGG TGTTGTTCTC GGCCAACCCG CAAACCCGCA GCGCGTACCA AAGGCTGTTC
CCCGAGCGTC GCATCGACAA ACGCTACCAC GCCATCGCCC CGGCCTTGCC CCAGCGTGAT
TTTCCGCTGG TGCATAAAAG CCGTCTGGTA CATGGCGAGC CGTTTTTCCG CATGCATGAG
GTACAGGGCG ACGATAATAG CGAAACCCTG GCCGAGGTGC TGGAGAAGCA GGGTGAGTTA
TGGCGCTACG GCCTTTCGCC GGTGACCGGC AAAACGCATC AACTGCGGGT GCACATGGCG
GCACTGGGGG CAGCGATCTG TAACGACCCG TTCTATCCTG AGTTGCTCAA GGTAGAAGAC
GATTACCAGC GGCCATTGAA GCTGTTGGCA CACAGCTTGC GCTTTGCCGA CCCGTTGACG
GGGGAGGAGC GCTATTTCGA GAGTCGTCTG ACCCTCGGTT GGTAG
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| Protein sequence | MTTPFDPARQ QASTVCLPPG NWATVLDCLC DHFKAIERAQ WLDRFARGRV LNAEGQAIAA
DLPYRRGMRL HYFREVPNER PIPVEEAILH VDEHLVVADK PHFLPVTPTG EYVEQTLLRR
LIRRLDNPHL VPLHRIDRHT AGLVLFSANP QTRSAYQRLF PERRIDKRYH AIAPALPQRD
FPLVHKSRLV HGEPFFRMHE VQGDDNSETL AEVLEKQGEL WRYGLSPVTG KTHQLRVHMA
ALGAAICNDP FYPELLKVED DYQRPLKLLA HSLRFADPLT GEERYFESRL TLGW
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