| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1619 |
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| Symbol | |
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| ID | 6110564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 1796934 |
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| End bp | 1800539 |
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| Gene Length | 3606 bp |
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| Protein Length | 1201 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641621410 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_001748493 |
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| Protein GI | 170720805 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.278595 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0196406 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCGAC TCATTGCCTG GCTGGCCCTT GCACTGCCAT TGGCCTGCTG CGCAGCGCAG
GCTTCTCAGC TTGAGGCGGT ACCGTATTCC CTTCTTGCCC GCTCCTCTGC CTCACCGGTA
ACCCCGCAAC TGAACGCGCA ACAGAGGGAA TGGCTGATGG GCCGCCAATA CCTGAAGCTG
GGCACGTCAG CACCGGACTA TCCGCCCTTC GACATAACCA GTGGCGGGCG CGACTATCAG
GGCCTCACCG CCGAATATGC CAGCCTGATC GGCAAGGTAC TGCAAGTGCC GATTCGGGTG
TTGCGCTATC CCAGCCGGCA AGCCGCAGTA GAGGCGCTCA AGAAAGGGGA TATCGACTTG
CTTGGCAGCG CCAATGGCTA CGAAGCAGCG AGCGATGGCC TGGCGCTTTC GCACCCTTAT
GCCGTCGACC AGCCGGTGCT GGTGACCCGC GAAGACGAAA GCCGCACGCT CAACCGCGGC
ATGGACGGCA TGCGCCTGGG CATGTTGTAT CACTATCTGC CACGAGAAGA AGTCAGCACT
GTATATCCCC AAGCCGAACT GCTGGCCTTC GGTTCGTCTT CCCAAGCCCT CAATGCCGTA
GCGTTCGGGC AGGCTGACGT GTTCATCGGC GATACCATCT CCACTCACTA TCAGCTCAAT
CGCGGTCATC TGCCGCGCCT GCGCATGGCG AGCTTCGGCA AACATGAAAG CGTCGGTTTC
AGTTTTGCAA TGCGCGCGCA AGATACCCAT CTCAAGGATC TGGTGAACCT GGCCCTGGAC
CGCCAGCCAG CCGCCGTGCG CGCGAGCATC TTCAAACGCT GGAGTGCCGG CAGCGACCTG
CTGCTGAGCG ACCGTAAGCT ACAGCTCACG ACCGAAGAGG AGCAGTGGTT GCGCCGCCAT
CCTGTGATGC AGGTGGCCAT CGACGAGACG GCCGCACCGC TGTCCTATTT CGACGGCAAT
GGCCATTTCC GCGGGATCAC CGCCGACCTG CTGGACCTGA TCCGCCTGCG TACAGGGCTG
CGCTTCGAAG TGCAGCGTAC CAACGGCATC GCCGAGATGA TCGCCCGACT TGAGGACGGG
CGCGTGAACA TGATCGCAGC ACTTGCCGTG GATGACATGA ACGAGGAGCA CTTGCACCTC
AGCCGACCTT ACCTGGAAAG CACCTATGTG CTGGTGACGC GCACCGAAAC GCCCCAGTAC
ACCTCACTGG AACAATTGCA GGGCCGCCGC ATCGCCATTA CCCGCTACAG CGAGATGTCC
GAACTGCTGG CAACCCGGTA CCCGCAGACC GGCTGGATCG AGACCGAGAG CCCCTACTAT
TCCATGGCAC TGTTGAGCAG TGGCGCAGTC GATGCCGTCA TCACGACCTT GATCGATGCC
AATCATGCCG TGGCAGGTAA CGCCAAACTG GTCATCCGCA GCACGGTCGG TACCGATCCT
GCGAGCTTCG CCATGGCCTC CTCCGCGCAG GCAACAGAGT TGGCATCGAT TCTGGACAAG
GCGTTGCTGA GCATTTCGCC GGAAGAACTG GGGGTGATCA ACAACCGCTG GAGTGGCTAC
AGCCAGCATG ATGACAGCAA TTGGCTGGGT TTCAGGCGCC TTGCCATGAA AGTGTTGCTG
GGGACCGCTT TGCTCCTGCT GGGGGCGCTG CTGTGGAACG CCCGGTTGCG CCGCCAGATC
AAACAGCGCC AGCACGCCGA ACGCGCCCTG AACGATCAGC TGGAGTTCAT GGGCGCACTG
CTCAACGGCA CCCCGCACCC GATGTATGTG CGGGACAGGG CGGGCTGCCT GCAAAGCTGC
AATGCCAGTT ATCTGGAAGC GGTGCAGGCG ACCCTCGACG AGGTCATAGG CAGGCGCCTG
GAAGACAGTC TGTTCGCTGG TTCGGAAAGT ACCCGCCAGA TCCATGCCGA CTATCTGCAG
GTGATGGCCG CCGGAGTTCC GCTCATCATC GACCGCCCCT TGCGGCTCAA GGATCGCGAA
ATCACGATCT ACCACTGGAT ACTGCCGTAC CGGGATTCAC TCGGTGAAGT CCAGGGCATC
ATCGGTGGCT GGATCGACAT CAGCGAGCGG CGCAAGCTGG TGCAGGAGCT GCGCGAGGCC
AAGCAACTGG CTGATGATGC CAACCGCGCC AAGAGTACCT TCCTGGCTAC CATCAGCCAC
GAGATTCGCA CCCCAATGAA CGCGGTCATC GGCATGCTCG AACTGGCGGT CAAGCGTGCC
CATCAAGGGC AGATCGATCG CACCTCCCTG GAGGTCGCCC ACCATTCGGC CAAGGACCTG
TTGGGCCTGA TCGGTGACAT CCTGGATATC GTGCGTATCG AGTCCGGCCA CCTGTCCCTT
GCACCCGAGC CCGTCGACCT TGCGGCGCTG GTCGAATCGG TGAGTCGCGT GTTCGATGGC
CAGGCACGGC AAAAAGGCCT GGCCTTCGAC GTCGTCATCG CCCCCAGTGC CCGCTGCCAC
GTCCTGCTCG ACCCACTACG CTTCAAGCAG ATCCTGTCCA ACCTGATCAG CAATGCCATC
AAGTTCACCG GGCAGGGCCA AGTGCGCATC AGCCTGTGCC TGCGTGAAGA AGCCCCGTCA
GCACCCCCGA GCCTGGAGCT GGAGGTGCGT GACACCGGCA TTGGCATTCA TGACGATGAC
TTGCAACGCC TTTTCAACCC ATTCGTTCAG GCCAACCCAC ATAGCCAGGG CGCTCGCGCC
GGCACGGGCC TGGGCCTGGC CATCTGCCGT AGCCTGTGCG AAATGATGGG CGCAAGCCTG
AGCATCAAGA GCGTGCCGGA TTTCGGCACG CAGGTTCGCT TCAGCGTACC GCTGCAACGT
GTCGACGCAC TGCCGCCGCA GGTGCTGGAA GCAGATGACA TGGATGCACC CGATGCCCGG
CTGAAGGTGC TGGTGATCGA CGACCACCCG GCCAACCTGA TGCTGATGGC CCAACAGCTG
GGGTACCTGG GCCTGAGCCA GGCCACTGCC AGCGATGGCC GCGAAGGCCT GGAAAAATGG
CGTGAAGGGC AATTCGACGT GATCGTCCTC GATTGCAACA TGCCGCATAT GAACGGCTAT
CAACTCGCCG CCGCCGTGCG CGCCGAAGAA CGCCAGAACG GGCGTCCTCC CTGCGTGATC
CTGGGCTATA CCGCCAACGC CCAGCCCGAA GTCAGGCAAA AATGCCTCAG TGTCGGTATG
GACGACTGCC TGCTCAAACC CATCAGCCTG CGCACACTGA GCCAACGCTT GGCGAATATC
GCTCCCCAGC GGGAGCCGGC CGCAACAGAG AGGCCGTTCG ATCTCAAAGG CCTGCACAGT
ATCGTTGGCG ATAACCCCAA TGACCGTGAA CTGTTTCTCG AGGCCTTGCT GTTGAGCCTA
CAGCAGGACC TGGCAACGCT CATGGGCCTG GACCCTGAAG TCGAACCCGA GGCCGTCGGC
GAGCAGGCAC ACAAGATCCT CAGCGCGGCG CGGATGCTGG AGGCGCAGCA CTTAATGGCG
GCCTGTGAGG CCCTGGAACA AAGCGGGTTG CCCGCATCAC AGCTGAAACA GCGGCGACAG
GCTTTGGCAC GGCACATGCG CCGCGTAGAG AAAGCCTTGG CCAGAGAACT GACCAAGCCT
CGATGA
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| Protein sequence | MARLIAWLAL ALPLACCAAQ ASQLEAVPYS LLARSSASPV TPQLNAQQRE WLMGRQYLKL
GTSAPDYPPF DITSGGRDYQ GLTAEYASLI GKVLQVPIRV LRYPSRQAAV EALKKGDIDL
LGSANGYEAA SDGLALSHPY AVDQPVLVTR EDESRTLNRG MDGMRLGMLY HYLPREEVST
VYPQAELLAF GSSSQALNAV AFGQADVFIG DTISTHYQLN RGHLPRLRMA SFGKHESVGF
SFAMRAQDTH LKDLVNLALD RQPAAVRASI FKRWSAGSDL LLSDRKLQLT TEEEQWLRRH
PVMQVAIDET AAPLSYFDGN GHFRGITADL LDLIRLRTGL RFEVQRTNGI AEMIARLEDG
RVNMIAALAV DDMNEEHLHL SRPYLESTYV LVTRTETPQY TSLEQLQGRR IAITRYSEMS
ELLATRYPQT GWIETESPYY SMALLSSGAV DAVITTLIDA NHAVAGNAKL VIRSTVGTDP
ASFAMASSAQ ATELASILDK ALLSISPEEL GVINNRWSGY SQHDDSNWLG FRRLAMKVLL
GTALLLLGAL LWNARLRRQI KQRQHAERAL NDQLEFMGAL LNGTPHPMYV RDRAGCLQSC
NASYLEAVQA TLDEVIGRRL EDSLFAGSES TRQIHADYLQ VMAAGVPLII DRPLRLKDRE
ITIYHWILPY RDSLGEVQGI IGGWIDISER RKLVQELREA KQLADDANRA KSTFLATISH
EIRTPMNAVI GMLELAVKRA HQGQIDRTSL EVAHHSAKDL LGLIGDILDI VRIESGHLSL
APEPVDLAAL VESVSRVFDG QARQKGLAFD VVIAPSARCH VLLDPLRFKQ ILSNLISNAI
KFTGQGQVRI SLCLREEAPS APPSLELEVR DTGIGIHDDD LQRLFNPFVQ ANPHSQGARA
GTGLGLAICR SLCEMMGASL SIKSVPDFGT QVRFSVPLQR VDALPPQVLE ADDMDAPDAR
LKVLVIDDHP ANLMLMAQQL GYLGLSQATA SDGREGLEKW REGQFDVIVL DCNMPHMNGY
QLAAAVRAEE RQNGRPPCVI LGYTANAQPE VRQKCLSVGM DDCLLKPISL RTLSQRLANI
APQREPAATE RPFDLKGLHS IVGDNPNDRE LFLEALLLSL QQDLATLMGL DPEVEPEAVG
EQAHKILSAA RMLEAQHLMA ACEALEQSGL PASQLKQRRQ ALARHMRRVE KALARELTKP
R
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