| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1617 |
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| Symbol | |
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| ID | 6110562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 1794902 |
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| End bp | 1796365 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641621408 |
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| Product | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase |
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| Protein accession | YP_001748491 |
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| Protein GI | 170720803 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
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| TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0013299 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCAAAT CGCTCCGCCC CCTCGTTCTC GCCGGCATGC TCCTGCCGTT CGCCATGCCC
GGCCATGCCG CAGCTGTCAA CACCACGCTG CCACCCAAGG TTCAGCAGGC GCTCAAAGCC
AGCAAACTGC AGGACACAGC ACTGTCGCTG GTGATGCTGC CGCTCAATGG CCCTGGCACG
CCGACCGTGT TCAACGCCGA TGTGTCGGTC AATCCGGCCT CGACCATGAA GCTGGTCACC
ACCTATGCAG CCCTCGAGCT GCTCGGCCCG ACTTTCCAGT GGAAGACCGA GTTCTACACT
GATGGCACGC TGAGCAACGG AGTGCTCAAC GGCAACCTGT ACCTCAAGGG CGGCGGTGAC
CCTAAGCTGA ACATGGAGAA GCTGTGGCTA TTGATGCGTG ACCTGCGCGC CAACGGCGTT
CGCACCATTA CCGGCGACCT GGTGCTGGAC CGCAGCCACT TCGTACAGCC CAACCTGCCT
CATTTCAATG ATGACGGCGG TGACGTGAAC AAGCCCTTCC TGGTCAAGCC CGACTCCTTG
CTGGTCAACC TCAAGGCTCT GCGCTTCGTC GCCCGCAACG ACGGCGGCAA GGTGACCGTC
GCCGTCGAGC CACCCATTGC GAGCATTCGC ATCGACAATC AGGTCAAGGC AGTTGCCTCC
AGAAAATGCA CTGGCGATGT ACGCTACAAC CCGGTGCCTC AAGCCGATGG TATGAATGTT
GTGGTCAGCG GCCAGCTGGG CGATGGCTGC AACTCGCAAA CCTACCTCGC GCTGCTCGAT
CACCCAACCT ACGCCGCCGG TGCCGTGCGC GCGATCTGGA ACGAACTGGG GGGCAGCATC
CAGGGCCGTG ACCGCATCGA GAACGTGCCC AAGGGCGCTC GGCTGCTGGC ACGGGCCTTC
TCGCCCGACC TGGTGGAGGT GATCCGTGAC ATCAATAAAT ACAGCAACAA CACGATGGCC
CAACAGCTGT TCCTGAGCCT TGGCGCACAG TTCCGTACCG ACGCCGATGG CGACGATGCC
CGCGCAGCCC AGCGCGTGGT TCGCCAGTGG ATGGCCAAGA AAGGTATCAC CGCGCCCCAC
CTGGTGATGG AAAACGGCTC TGGCCTGTCG CGCGCTGAAC GGGTAAGCAC GCGCGAAATG
GCCGCACTGC TGCAGGCGGC GTGGAATAGC CCCTACTCCG CCGAATTCAT CAGTTCAATG
CCGTTGGTGG GCATGGACGG CACCATGCGC AAGCGCCTCA AGCGTACCGC CTTGGCCGGT
GAAGGCCACA TCAAGACCGG CACCCTGAAT ACCGTACGCG CCATTGCCGG CTTCAGCCGT
GACAGCAACG GCAATACCTG GGCAGTGGCG GCGATTCTCA ACGACCCGAA ACCCTGGGGG
GCATCGCAGG TACTCGACCA GGTACTGCTG GACCTGTATC GCCAGCCCAA AGCCGCTAAC
CGGACGGTAG GCGTCAACCC ATGA
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| Protein sequence | MIKSLRPLVL AGMLLPFAMP GHAAAVNTTL PPKVQQALKA SKLQDTALSL VMLPLNGPGT
PTVFNADVSV NPASTMKLVT TYAALELLGP TFQWKTEFYT DGTLSNGVLN GNLYLKGGGD
PKLNMEKLWL LMRDLRANGV RTITGDLVLD RSHFVQPNLP HFNDDGGDVN KPFLVKPDSL
LVNLKALRFV ARNDGGKVTV AVEPPIASIR IDNQVKAVAS RKCTGDVRYN PVPQADGMNV
VVSGQLGDGC NSQTYLALLD HPTYAAGAVR AIWNELGGSI QGRDRIENVP KGARLLARAF
SPDLVEVIRD INKYSNNTMA QQLFLSLGAQ FRTDADGDDA RAAQRVVRQW MAKKGITAPH
LVMENGSGLS RAERVSTREM AALLQAAWNS PYSAEFISSM PLVGMDGTMR KRLKRTALAG
EGHIKTGTLN TVRAIAGFSR DSNGNTWAVA AILNDPKPWG ASQVLDQVLL DLYRQPKAAN
RTVGVNP
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