| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1615 |
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| Symbol | rlmL |
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| ID | 6110560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 1790161 |
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| End bp | 1792353 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641621406 |
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| Product | 23S rRNA m(2)G2445 methyltransferase |
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| Protein accession | YP_001748489 |
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| Protein GI | 170720801 |
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| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
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| COG ID | [COG0116] Predicted N6-adenine-specific DNA methylase
[COG1092] Predicted SAM-dependent methyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0000568261 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGGACC GTTTCGAACT TTATCTCACC TGCCCCAAAG GCCTTGAAGG CCTGCTTGCC
GAAGAGGCCA AGGGCCTCGG CCTGGACGAT GTGCGCGAGC ACACCTCGGC CATCCGCGGC
GCGGCCGACA TGGAAACCGC CTACCGCCTG TGCCTCTGGT CGCGTCTGGC CAACCGCGTG
CTGCTGGTGC TCAAGCGCTT CAACATGAAA AATGCCGACG ACCTTTACGA TGGCGTGAAC
GCTGTCGACT GGGCTGATCA CCTGGCGGCC GACGGTACCC TGGCGGTCGA GTTCAGCGGC
CATGGCTCGG GCATCGACAA CACCCACTTT GGCGCGCTGA AGGTCAAGGA TGCCATCGTC
GACAAACTGC GCAATCGTGA AGGTCTGCGC CCATCGGTAG AAAAAGTTGA CCCGGACGTG
CGTGTTCACC TGCGTCTGGA CCGGGGCGAG GCGATTCTTT CACTCGACCT CTCCGGCCAC
AGCCTGCACC AGCGCGGCTA TCGCCTGCAG CAAGGTGCTG CACCGCTCAA GGAAAACCTG
GCGGCGGCGG TGTTGATCCG TGCCGGCTGG CCACGTATCG CCGCCGAGGG TGGCGCCCTG
GCCGACCCGA TGTGCGGTGT AGGCACCTTC CTGGTCGAAG CGGCGATGAT CGCCGCCGAT
ATGGCACCTA ACCTCAAGCG CGAGCGCTGG GGCTTCAGCG CCTGGCTTGG CCATGTGCCG
GCCACCTGGC GCAAGGTTCA CGAAGAGGCT CAGGCCCGTG CACAGGCCGG CCTGGCCAAG
CCGCCGCTGT GGATTCGCGG CTACGAGGCA GACCCGCGGC TGATCCAGCC GGGGCGCAAC
AACGTCGAAC GCGCGGGCTT GAGTGAATGG GTCAAGATCT ATCAGGGAGA AGTCGCCAGC
TTCGAACCGC GCCCTGATCA GAACCAGAAG GGTCTGGTCA TCAGTAACCC GCCCTACGGC
GAGCGCCTGG GTGACGAAGC CAGCTTGCTG TACCTCTACC AGAACCTCGG CGAGCGCCTG
CGCCAGGCGT GCATGGGCTG GGAAGCCGCA GTGTTCACCG GTGCGCCGGA GCTGGGCAAG
CGCATGGGCA TCCGTAGCCA CAAGCAATAT GCGTTCTGGA ACGGCGCGCT GCCGTGCAAG
CTGCTGCTGT TCAAGATTCA GCCTGACCAG TTCGTCACCG GCGAACGTCG CGAGGCCCAG
GCCGATAGCG GCGATACCCA CCGACCGCTG CCGGTAGCCA GTGAGCCTGC ACGCCTGTCT
GAAGGCGCTC AGATGTTCGC CAACCGCCTG CAGAAGAACC TCAAGCAACT GGGCAAGTGG
GCCCGCAAGG AGCAGATCGA CTGCTACCGC GTATACGATG CCGACATGCC TGAATATGCC
TTGGCGGTCG ACCTCTATCA GGATTGGGTA CACGTACAGG AATACGCCGC ACCGCGCTCG
ATCGACCCGG AAAAGGCCCA GGCGCGCCTG ATCGATGCCT TGTCGGCGAT CCCCCAGGCG
CTGGGCGTCG ACCCGCAGCG CGTGGTGCTC AAGCGCCGCG AGCGGCAGAG CGGCACCCGC
CAGTACGAGC GCCAAGCCAC CGAAGGGCGC TTCCAGGAGG TCAGCGAAGG TGGCGTCAGG
CTGCTGGTGA ACCTCACCGA CTACCTCGAC ACCGGCCTGT TCCTCGACCA CCGCCCGATG
CGCATGCGCA TCCAGCGCGA GGCCGCTGGC AAACGCTTCC TCAACCTGTT CTGCTACACC
GCCACGGCCA GCGTGCATGC CGCCAAGGGC GGTGCGCGCA GCACCACCAG CGTCGACCTG
TCCAAGACCT ACCTGGACTG GGCGCGGCGT AACCTGTCGC TGAACGGCTT CTCCGAGCGC
AATCGCCTGG AGCAGGGTGA TGTCATGGCC TGGCTGGAAG CCAATCGCGA CACTTACGAC
CTGATCTTCA TCGACCCTCC AACCTTCTCC AACTCCAAAC GTATGGAAGG TGTGTTCGAC
GTGCAGCGTG ACCATGTGCA ACTGCTCGAC CTGGCCATGG CGCGTCTTGC GCCCGGTGGT
GTGCTGTACT TCTCCAACAA CTTCCGCAAG TTCCAGCTCG ACGAGCATCT GGCTGCACGC
TACGTGGTTG AGGAAATCAC TGCGCAGACA CTGGACCCGG ACTTCGCCCG CAACAACCGC
ATCCACCGTG CCTGGCGCCT GCAACTGCGC TAA
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| Protein sequence | MSDRFELYLT CPKGLEGLLA EEAKGLGLDD VREHTSAIRG AADMETAYRL CLWSRLANRV
LLVLKRFNMK NADDLYDGVN AVDWADHLAA DGTLAVEFSG HGSGIDNTHF GALKVKDAIV
DKLRNREGLR PSVEKVDPDV RVHLRLDRGE AILSLDLSGH SLHQRGYRLQ QGAAPLKENL
AAAVLIRAGW PRIAAEGGAL ADPMCGVGTF LVEAAMIAAD MAPNLKRERW GFSAWLGHVP
ATWRKVHEEA QARAQAGLAK PPLWIRGYEA DPRLIQPGRN NVERAGLSEW VKIYQGEVAS
FEPRPDQNQK GLVISNPPYG ERLGDEASLL YLYQNLGERL RQACMGWEAA VFTGAPELGK
RMGIRSHKQY AFWNGALPCK LLLFKIQPDQ FVTGERREAQ ADSGDTHRPL PVASEPARLS
EGAQMFANRL QKNLKQLGKW ARKEQIDCYR VYDADMPEYA LAVDLYQDWV HVQEYAAPRS
IDPEKAQARL IDALSAIPQA LGVDPQRVVL KRRERQSGTR QYERQATEGR FQEVSEGGVR
LLVNLTDYLD TGLFLDHRPM RMRIQREAAG KRFLNLFCYT ATASVHAAKG GARSTTSVDL
SKTYLDWARR NLSLNGFSER NRLEQGDVMA WLEANRDTYD LIFIDPPTFS NSKRMEGVFD
VQRDHVQLLD LAMARLAPGG VLYFSNNFRK FQLDEHLAAR YVVEEITAQT LDPDFARNNR
IHRAWRLQLR
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