Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1608 |
Symbol | |
ID | 6110553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 1782522 |
End bp | 1783262 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641621399 |
Product | uroporphyrin-III C-methyltransferase |
Protein accession | YP_001748482 |
Protein GI | 170720794 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0007] Uroporphyrinogen-III methylase |
TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000713921 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000000000148067 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAATGCGA AAGTCTGGCT GGTCGGTGCC GGCCCCGGTG ACCCTGAACT GCTCACCCTC AAGGCGGTAC GTGCGCTGCA ACAGGCCCAT GTAGTGATGA TCGACGACCT GGTCAACCCG GCCGTGCTGG AACACTGCCC GAAGGCACGG GTGATCGCCG TGGGCAAACG GGGTGGCTGC CGCTCCACGC CCCAGGCGTT CATTCAGCGC CTGATGCTGC GCCATGCGCG GCAGGGCCGC TGCGTTGTGC GGCTCAAAGG CGGCGACCCG TGCATTTTTG GACGTGGCGG CGAGGAGGCC TTGTGGCTGC AAGGGCATGG CATCGAGGTG GAAGTGGTAA ACGGTATTAC TGCAGGCCTG GCAGGCGCGA CCCAGTGTGG CATTTCGCTT ACCTCACGCG GGATCAGCCG TGGCGTGACA CTGGTGACCG CGCACACCCA GGATGACAGC GAGCTGAACT GGACGGCGCT GGCACAGGGT GGCACGACCC TGGTGGTGTA CATGGGGGTG GCGAGGCTGG AGCAGATTCG CCAGGGCTTG CTGGACGGCG GCATGGCGCC GGGGATGCCG GTAGCGATGA TCGAGAATGC GTCACTGCCT GGGCAGCGCG AGTGCCGCAG CGACTTGCGG GGGATGCTGG AGGATGCGCG GGCGTTCGGC TTGCGCAGCC CGGCAATCCT GGTGATTGGC GAGGTGGCAG GGAACCTGGA GGCCCATCAG CGGATGGCGG CAGCCGGATG A
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Protein sequence | MNAKVWLVGA GPGDPELLTL KAVRALQQAH VVMIDDLVNP AVLEHCPKAR VIAVGKRGGC RSTPQAFIQR LMLRHARQGR CVVRLKGGDP CIFGRGGEEA LWLQGHGIEV EVVNGITAGL AGATQCGISL TSRGISRGVT LVTAHTQDDS ELNWTALAQG GTTLVVYMGV ARLEQIRQGL LDGGMAPGMP VAMIENASLP GQRECRSDLR GMLEDARAFG LRSPAILVIG EVAGNLEAHQ RMAAAG
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