| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1605 |
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| Symbol | |
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| ID | 6110550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 1779771 |
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| End bp | 1780595 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641621396 |
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| Product | TM helix repeat-containing protein |
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| Protein accession | YP_001748479 |
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| Protein GI | 170720791 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00681338 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000000000154997 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGAACTCG ATCTCTGGAC CCAGAGCCTG GTCACTGCCA TGACCGCCCT ATGGACCAAG
GTGGCGAACT TCATCCCCAA CCTGTTCGGC GCGCTGGTGG TGGTGCTGCT CGGTTTCGTG
GTGGCCAAGC TGCTCGATAC GTTGTTGTCC AAGCTGCTGG CCAAGTTTGG TCTGGATCGC
CTTATGGCCG GTACCGGTCT GACCAAAATG CTCAGCCGTG GTGGCATTCA GGTGCCGATC
TCGACCTTGA TCGGCAAGAT CGTCTACTGG TTCGTACTGC TGATTTTCCT GGTTTCTGCC
GCCGAATCGC TTGGCCTCGA ACGCGTCTCC GCAACCCTCG ACATGCTTGC CCTATACCTG
CCCAAGGTGT TTGGCGCAGC TTTGGTGTTG CTGGTTGGCG TGCTGCTGGC GCAAGTAGCC
AACGGCCTGG TGCGTGGTGC TGCCGAAGGC ATCGGCCTGG AGTACTCCGC AGGTCTTGGG
CGCATTACCC AAGGCCTGGT GATCATCATC AGCATTTCGG TGGCGATCAG CCAGCTTGAG
GTCAAGACCG ACCTGCTCAA CCACGTTATC GTGATCGGGC TGATTACCGT TGGTCTGGCC
GTTGCGCTTG CGATGGGGCT TGGCAGTCGC GAAATCGCCG GGCAGATTCT GGCTGGTATC
TATGTGCGTG AGCTTTACCA GGTCGGCCAG CAGGTGCGGA TTGGAGAGGT CGAGGGGCAG
ATCGAGGAGA TCGGCACGGT AAAGACGACG TTGCTGACCG ATGATGGCGA ACTGGTGTCG
TTGTCTAATC GAGTATTGCT CGAGCAACGC GTCAATAGCC GCTAA
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| Protein sequence | MELDLWTQSL VTAMTALWTK VANFIPNLFG ALVVVLLGFV VAKLLDTLLS KLLAKFGLDR
LMAGTGLTKM LSRGGIQVPI STLIGKIVYW FVLLIFLVSA AESLGLERVS ATLDMLALYL
PKVFGAALVL LVGVLLAQVA NGLVRGAAEG IGLEYSAGLG RITQGLVIII SISVAISQLE
VKTDLLNHVI VIGLITVGLA VALAMGLGSR EIAGQILAGI YVRELYQVGQ QVRIGEVEGQ
IEEIGTVKTT LLTDDGELVS LSNRVLLEQR VNSR
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