| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1594 |
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| Symbol | |
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| ID | 6110539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 1764042 |
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| End bp | 1765370 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641621385 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001748468 |
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| Protein GI | 170720780 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00000379312 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGGTAC ACGAGGCGGC CCCGGCCGCG AGCGAGACAC CAGCACAGAA ACGCAAGCGC
CTGCGCAAGG TGGCGGCGGC AACCATCTTC GGTTCGATGC TGGAGTGGTA TGACTTCTAC
CTCTACGCGA CCATGGCGGC GATCGTGTTC TCGAAGATTT TCTTCGATGC CAGCAACCCG
GCAGTGGCTT CACTGCTGGC GTTCTCCACG TTTGCCATCG GTTTTGTCGC GCGCCCATTC
GGCGGGGTTC TGTTTGGCTA CCTGGGCGAC CGCTTCGGCC GCAAGCATGT ACTGGTTATC
ACGTTCTGCA TGATGGGTGT GTGCACCGCG CTGATCGGTC TGATCCCCAG CTACGCCTCG
ATCGGTATCT GGGCACCGAT TCTGCTGGTA GTGATCCGCA TCATCCAGGG CCTGGGCGCC
GGTGCAGAGC TGTCCGGGGC GGCCGTCACC TCCTACGAAC ATGCCAGCGA AGGCAAGCGC
GGCAGCCAGG GCGCTTGGCC AGCACTGGGG CTCAACCTGG GCTTGCTGCT GTCGTCGCTG
ACCGTTTACC TGCTGACCAT GAACGGCAAC GAGTTTCTCC TCGCCGGTGG CTGGCGCATT
CCGTTCATCG CCAGCATCGC CCTGGTGGCG ATCGGCCTTT GGGTGCGTAA GAGCATTCCT
GAGACACCGG ACTTCAAAGA ACTCGACAAG GCCGATGCCA AACCGCAGGA GTCACCGCTG
AAACTGCTGT TCAGGAACGA TCTCAAAGGC TTGGCCGTGG TGTTTTTCGT GGCCATCGGC
TACAACGCTC TGAGCTACAT ATTCAAGACG TTCTCGCTGG CATACCTGAC TCAGTTCAAA
GGTGTCGAGG CACATGTCAC CTCCCTGTCG GTGACCATCG CCAGCCTGGT GGCGATCTTT
GCCGTACCGT TCTTCGGCTG GCTGTGCGAC CGCTGGAGCA GCAAGACCGT GTTGATGCTC
GGCGGCGTGC TGTCGGCGCT GTTTGCTTAT CCATTCTTGC AGTTGCTGAG CAGCGGTGAG
CCAACACTGA TCTATGTGGC CATTGCCATC GGCACCGGCC TCCTCGCGCC AATGATGTTC
GCCCCCCAGG GCTCGTTCCT TAGCCGGCAG TTCCCGACCC AGACGCGCTC TTCCGGTTTC
GGCACCGGGC GCGAGATTGG CACTGCAGTG GCCGGCGGCC TGGCGCCCCT GGGCGGCCTT
GCCTTGGTGG CGAACTCGGC GACCCACTCC ACCGACGGCG TGGCTTTGAT CCTGGCGGTT
TCCGGTGTGC TGGTGGTGGT GTTTGCCTTG TGTGACCAAG GCCGCAAGCA CTCCAGTTCG
AAAAACTGA
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| Protein sequence | MSVHEAAPAA SETPAQKRKR LRKVAAATIF GSMLEWYDFY LYATMAAIVF SKIFFDASNP
AVASLLAFST FAIGFVARPF GGVLFGYLGD RFGRKHVLVI TFCMMGVCTA LIGLIPSYAS
IGIWAPILLV VIRIIQGLGA GAELSGAAVT SYEHASEGKR GSQGAWPALG LNLGLLLSSL
TVYLLTMNGN EFLLAGGWRI PFIASIALVA IGLWVRKSIP ETPDFKELDK ADAKPQESPL
KLLFRNDLKG LAVVFFVAIG YNALSYIFKT FSLAYLTQFK GVEAHVTSLS VTIASLVAIF
AVPFFGWLCD RWSSKTVLML GGVLSALFAY PFLQLLSSGE PTLIYVAIAI GTGLLAPMMF
APQGSFLSRQ FPTQTRSSGF GTGREIGTAV AGGLAPLGGL ALVANSATHS TDGVALILAV
SGVLVVVFAL CDQGRKHSSS KN
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