| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1593 |
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| Symbol | |
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| ID | 6110538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 1762686 |
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| End bp | 1763993 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641621384 |
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| Product | rhs element Vgr protein |
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| Protein accession | YP_001748467 |
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| Protein GI | 170720779 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0000136682 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATGAGCA AGCAGTACGG TATACCTGCC CCGGTCACCC TGCGGGTGGG CGTTTTTTTC
GATGGCACCG GCAACAATCA GGGCAACGCT GCACCCTTGG CTTCCACCGG CCGCGGTTGC
GCAGGGGGTA GTTACGCCAA TGCCCGCAGT AACATTGCCC TGCTGCACGC GCTTTATCCC
TCCGGGCCTG TGCTAGGTCA GGTCCATTTC AGCGTTTATG TGCAAGGTAT CGGTACAACT
CACGGTGCGC CTGACTCGTC CTTCGCCCAG GCGACGGGGC GTGGAAGCGC GGGGGTGGCG
GCCCGGGTAG ATCAGGCGTT GGTGGAGGTT GGCAGGCAGC TGCGCGATTA TCGGGCTGAG
CATCCGCAGG TTGTACCCAA GTGCATCGAA TTCGACCTGT TCGGTTTCAG TCGCGGTGCT
GCGGCGGCCA GGCATCTGGC CAATCGGCTG GGCAAGGATG AGGCGGGCTT GCCGGCTGAG
CTGCACGGGG ACCGGGCGAT CAACTTCATT GGTCTGTTCG ATACGGTGGC GGCAATCGTT
GCACCTTTGC AAGGCAGCTT CGACCCTGCC AGCGATCAAT ACGGCGGTTT GCGTCTCGGG
CTGGACACGC TCGTCGCACG GCAGGTGGTG CAACTGGTGG CAGGTGATGA GCAGCGCCAC
AACTTCCCGC TGGTGCGCAG CGACAACGAC ATAGTCGTGC CGGGTGTGCA CTCGAATATC
GGTGGCGGTT ATCGGGAGCA CATGCGTGAG CAGGTTCTTT TGTGCAAACC GCAGTCGAGC
CGGGTCGCGC GGACGACGCC GGCTGAATGC ACAAGCGCCC ATGCGGCGGT CAATGCGCTG
CTGACCTCAA CTTTTGCAGG CCTGGTCGAT CCGCGGCCAA GGCTGCTCAG CTGGGAGGTG
CCGATCGAAG GCAGCCGAGC CAAGCGCGAT GACCCGGAAA AGCAGGTGTA TGCCGCTGTG
TACCGAGAAC GTGAAGTCAA TGGCCATCTG TCACGTGTCT ACCTCAGCAT CATGCGTGAA
CTGGCCGTGC GCGGTGGCGT ACCGTTCGCC CCTCTGGGCA GTGACGATGC GCATCACCTA
CCGGCAGAGT TGCTGCCTGT CAGCCGCAAA CTGCATGAAT TTGCCCTCGG GCAATGTGCG
CAACCGCGCC TGACGACCCA GGAACGAGCG TTGCTGCAGG CAAAGTATGT ACACACATCG
GCGCACTGGA ACGCCGTGAA AGGGCTGGAT AACAGTGCGC TGGATTCGTT TTACATCGAC
CGGCCGGGCA AGGCGGGCAG GGTGCTGCAC AAGAACCCGG TTGGCTGA
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| Protein sequence | MMSKQYGIPA PVTLRVGVFF DGTGNNQGNA APLASTGRGC AGGSYANARS NIALLHALYP
SGPVLGQVHF SVYVQGIGTT HGAPDSSFAQ ATGRGSAGVA ARVDQALVEV GRQLRDYRAE
HPQVVPKCIE FDLFGFSRGA AAARHLANRL GKDEAGLPAE LHGDRAINFI GLFDTVAAIV
APLQGSFDPA SDQYGGLRLG LDTLVARQVV QLVAGDEQRH NFPLVRSDND IVVPGVHSNI
GGGYREHMRE QVLLCKPQSS RVARTTPAEC TSAHAAVNAL LTSTFAGLVD PRPRLLSWEV
PIEGSRAKRD DPEKQVYAAV YREREVNGHL SRVYLSIMRE LAVRGGVPFA PLGSDDAHHL
PAELLPVSRK LHEFALGQCA QPRLTTQERA LLQAKYVHTS AHWNAVKGLD NSALDSFYID
RPGKAGRVLH KNPVG
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