| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1588 |
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| Symbol | |
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| ID | 6110533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 1757266 |
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| End bp | 1758984 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641621379 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001748462 |
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| Protein GI | 170720774 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00107949 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCGACC TCTGGCCGCA CTGGTTGCGC CCACTCTGGC TGCTGGTGGT ACCGCTGCTC
GCCTGGCTGT TGTTCAAGCT CTGGCACCGG CGCAGGCGCG CCGGGCGCTG GCAGATGATC
CTGCCGCCGG CTTTCCACCC GGTGCTGCTC GGTGGCGGCA GCGGCAGCCA CAGCAAACTA
CCTTGGGTCG CACTGGGCCT GGCCTGGTTA CTGGTGGTAC TGGCGCTGCT CGGGCCTAGC
TGGGAGCGCC TGGAAGAAAC CCGCCAACGC CCGGCCGACC CGCTGGTGAT CCTGCTCGAA
CTGACGCCGC AGATGCTTGC CGAGGACACG CCGCCCAACC GGCTGCAGCA GGCTCGGCGC
AAGGTCCTGG ACCTGCTCGA ACACCGCCGC AACAGCCAGA CCGCCTTGAT CGTCTATGCA
GGCAGCGCAC ATACCTTGGT ACCGCTGTCC GACGACCTGA GCACCACGCG CAACCTGCTC
GAGGCCGTCG ACCCTTCGAT CATGCCGCAG CCCGGCCAGC GCGCCGACCT GGCCGTGCAA
AAAGGCTTGG CCCTGCTGGC GCAGAGCGGC CTGGGCCAAG GCCGCCTGCT GCTGATCGGT
TCGGCATTGA GCGCCCCGGA ACGCCAGGGC ATCGTCCAGG CCCTTGGCCG CCAGGGCCCG
AGCCTGTTGA TGCTCGGAAT CGGTACCAGC GAGGGGGCTC CGGTGCGCCA GGCCAACGGC
GAGTTCCTCA AGGACGAGCA AGGCGGCATT CTGGTACCGC GCCTGGACAG CAGCGGGCTC
AGGACGTTCA TCAACGGCAC CGGTGGCCGC TACCGTCATG CCCGCATCGA CGACCTCGAC
CTGCGGGGCC TCGGCCTGTA CGACAACCCG CGCATCCTGC GCAATGACGG CCAGAACCTG
CAACTCGACA GCTGGGCCGA TCAAGGCTAC TGGCTGTTGA TACCCCTGTT ACTGCTGGCC
GCCTGCGCGG GTCGGCGCGG CTGGCTGTTC TGCCTTCCGC TGCTGCTGGC TCTGCCGCAG
CCGAGCCAGG CGTTCGAGTT CAATGACCTG TGGTTGCGTC CCGACCAGCA GGGCCAGCGC
CTGCTTGAAC AGAACCGCCC GGTGGAGGCT GCCCGGCACT TCCAGGACCC GCAATGGCGC
GGCATGGCGC TGTACCAGGC CGGCGACTAC GCCGCCGCCG CCAAGGCCTT TGCCCAAGGC
AATACGACAG CCGCCCACTA CAATCGAGGC AATGCCCTGG CCCGCAGCGG CGAGCTGGAG
GCCGCTCTGG ATGCCTATGA GCAAGCCCTC GAGCGCCAGC CCGATTTCAA GCCGGCGCTG
GATAACCAGG CACTGATCCA GCAGCTGTTG CAGCAACGCG AAGCACAGGC CGAGGAACAA
CCGGCCAAAG ACGATGCCCA AGGCACGCCC GGCAGCGAGA CCGAGGGCAA CAGCAGCTCG
GCCAGCAGCC CGGCGCAGGG CACGCCCGGC AACGATGAAC AGGCCAACGC CGAACAGCCC
GGCCAAGACA GCAACAACAG CCAGGCCACT CCCGGAAACC AGGGTGGCGA CGATGACAGC
ATCACCCAGC CGCCCAAGCG GCCGGTTTCG ACCAGCCTCG ACGCCGAGCA ACGCCAGGCC
CTGGAACAAT GGCTGCGGGA AATCCCCGAC AACCCGGCGC AGCTGCTACG CCGCAAATTC
TGGTATGAAC AGCAATTGCA TCAGGAAACC CCACGATGA
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| Protein sequence | MIDLWPHWLR PLWLLVVPLL AWLLFKLWHR RRRAGRWQMI LPPAFHPVLL GGGSGSHSKL
PWVALGLAWL LVVLALLGPS WERLEETRQR PADPLVILLE LTPQMLAEDT PPNRLQQARR
KVLDLLEHRR NSQTALIVYA GSAHTLVPLS DDLSTTRNLL EAVDPSIMPQ PGQRADLAVQ
KGLALLAQSG LGQGRLLLIG SALSAPERQG IVQALGRQGP SLLMLGIGTS EGAPVRQANG
EFLKDEQGGI LVPRLDSSGL RTFINGTGGR YRHARIDDLD LRGLGLYDNP RILRNDGQNL
QLDSWADQGY WLLIPLLLLA ACAGRRGWLF CLPLLLALPQ PSQAFEFNDL WLRPDQQGQR
LLEQNRPVEA ARHFQDPQWR GMALYQAGDY AAAAKAFAQG NTTAAHYNRG NALARSGELE
AALDAYEQAL ERQPDFKPAL DNQALIQQLL QQREAQAEEQ PAKDDAQGTP GSETEGNSSS
ASSPAQGTPG NDEQANAEQP GQDSNNSQAT PGNQGGDDDS ITQPPKRPVS TSLDAEQRQA
LEQWLREIPD NPAQLLRRKF WYEQQLHQET PR
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