| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1549 |
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| Symbol | leuD |
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| ID | 6110490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 1709463 |
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| End bp | 1710107 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641621336 |
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| Product | isopropylmalate isomerase small subunit |
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| Protein accession | YP_001748423 |
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| Protein GI | 170720735 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
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| TIGRFAM ID | [TIGR00171] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.226385 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGCCT TTACCCAGCA CACCGGTCTC GTCGCGCCGT TGGACCGTGC CAACGTCGAC
ACCGATCAGA TCATTCCCAA GCAGTTCCTC AAGTCGATCA AGCGTACCGG CTTTGGCCCC
AACCTGTTCG ACGAGTGGCG TTACCTGGAC GTGGGCCAGC CTTACCAGGA CAACAGCAAG
CGCCCGCTGA ACCAGGAGTT CGTGCTCAAC CACGAACGCT ACCAGGGTGC CAGCGTGCTG
CTGGCGCGGG AGAACTTCGG TTGCGGTTCG AGCCGTGAGC ACGCCCCTTG GGCGCTGGAC
GAATACGGCT TCCGCAGCGT GATCGCGCCG AGCTTCGCTG ACATCTTCTT CAACAACAGC
TTCAAGAACG GCCTGCTGCC GATCATCCTG AGCGATGAGG AAGTGGAAGA ACTGTTCAAG
CAGGTCGAAG CCAACCCTGG CTACCAGTTG ACCATCGACC TGCAGGCGCA GGCTGTGACC
CGTCCGGACG GCAAGGTGCT GCACTTTGAG ATCGATGCGT TCCGCAAGCA CTGCCTGCTC
AACGGCCTGG ACGATATCGG CCTGACCTTG CAGGACGGCG AAGCGATCAA GGCGTTCGAA
GGCAAGCACC GCGCTGCACA GCCCTGGCTG TTCCGTGATG CCTGA
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| Protein sequence | MKAFTQHTGL VAPLDRANVD TDQIIPKQFL KSIKRTGFGP NLFDEWRYLD VGQPYQDNSK
RPLNQEFVLN HERYQGASVL LARENFGCGS SREHAPWALD EYGFRSVIAP SFADIFFNNS
FKNGLLPIIL SDEEVEELFK QVEANPGYQL TIDLQAQAVT RPDGKVLHFE IDAFRKHCLL
NGLDDIGLTL QDGEAIKAFE GKHRAAQPWL FRDA
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