| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1548 |
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| Symbol | |
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| ID | 6110489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 1708033 |
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| End bp | 1709466 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641621335 |
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| Product | isopropylmalate isomerase large subunit |
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| Protein accession | YP_001748422 |
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| Protein GI | 170720734 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.272021 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGGCA AAACGCTCTA CGACAAACTC TGGGAAGCCC ATGAGGTCAA GCGCCGTGAT
GACGGCTCGT CCTTGATCTA CATCGACCGC CATATCATTC ACGAAGTGAC CTCGCCCCAG
GCCTTTGAAG GCCTGCGCCT GGCCAACCGC AAGCCGTGGC GCATCGATGC CAACATCGCT
ACCCCGGACC ACAACGTGCC GACCACCCCG GAACGCAAGG GCGGGATCGA GGCCATCGTC
GACCAGGTGT CACGCCTGCA GGTGCAGACC CTTGATGAGA ACTGTGACGA ATACGGCATC
GTCGAATTCA AGATGAATGA CGTGCGTCAG GGCATCGTTC ACGTCATCAG CCCCGAGCAG
GGCGCCACCT TGCCCGGCAT GACCGTGGTC TGCGGTGACT CGCACACTTC CACCCACGGC
GCCTTCGGTG CCTTGGCCCA TGGCATCGGC ACCTCCGAGG TCGAGCACGT GCTCGCCACC
CAGTGCCTGG TCGCCAAAAA GATGAAAAAC ATGTTGGTGC GCGTCGAGGG GACATTGCCC
GCCGGCGTGA CGGCCAAAGA CATCGTGCTT GCCGTGATCG GCAAGATCGG TACCGCCGGT
GGCAACGGCC ACGCCATGGA ATTTGCTGGT AGCGCCATCC GCGAGCTGTC CATGGAAGGC
CGCATGACCA TCTGCAACAT GTCGATCGAG GCCGGTGCGC GGGTCGGTCT GGTTGCCACC
GATGCCACCA CCATTGCTTA CGTCGAAGGC CGCCCTTATG CGCCCAAAGG CGAGCAGTGG
GAGCGTGCAG TCGAGGCGTG GAAAGACCTG GTATCCGATG ACGATGCGGT GTTCGACACC
GTGGTCGAGC TCGATGCAGC GCAGATCAAG CCGCAGGTCA GCTGGGGCAC GTCGCCCGAG
ATGGTCCTGG CCGTCGACCA GCGTGTGCCG GACCCAGCCG CCGAGGCCGA TCTGGTCAAG
CGCGGCTCGA TCGAGCGCGC CCTCAAGTAC ATGGGCCTGC GCGCCAACCA GGCGATTACC
GATATCCATC TGGACCGTGT GTTCATAGGC TCCTGCACCA ACTCGCGGAT CGAAGACCTG
CGAGCCGCAG CTGAAATCGC CAAAGGTCGC AAGGTGGCTG CCACCGTCAA GCAGGCCATC
GTCGTGCCGG GTTCGGGCCT GGTAAAGGCC CAGGCCGAGC GTGAAGGCCT GGACAAGATC
TTCCTCGAGG CCGGTTTCGA ATGGCGTGAG CCAGGCTGCT CTATGTGCCT GGCGATGAAC
CCGGACCGCC TGGAAAGCGG CGAGCATTGC GCGTCCACCT CCAACCGTAA CTTCGAAGGG
CGTCAGGGCG CTGGGGGCCG TACCCACCTG GTCAGCCCGG CCATGGCTGC CGCTGCGGCG
GTGACTGGCC ACTTCATCGA TGTTCGCGAG TTGATCCAAG GGAGCGCAGC ATGA
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| Protein sequence | MAGKTLYDKL WEAHEVKRRD DGSSLIYIDR HIIHEVTSPQ AFEGLRLANR KPWRIDANIA
TPDHNVPTTP ERKGGIEAIV DQVSRLQVQT LDENCDEYGI VEFKMNDVRQ GIVHVISPEQ
GATLPGMTVV CGDSHTSTHG AFGALAHGIG TSEVEHVLAT QCLVAKKMKN MLVRVEGTLP
AGVTAKDIVL AVIGKIGTAG GNGHAMEFAG SAIRELSMEG RMTICNMSIE AGARVGLVAT
DATTIAYVEG RPYAPKGEQW ERAVEAWKDL VSDDDAVFDT VVELDAAQIK PQVSWGTSPE
MVLAVDQRVP DPAAEADLVK RGSIERALKY MGLRANQAIT DIHLDRVFIG SCTNSRIEDL
RAAAEIAKGR KVAATVKQAI VVPGSGLVKA QAEREGLDKI FLEAGFEWRE PGCSMCLAMN
PDRLESGEHC ASTSNRNFEG RQGAGGRTHL VSPAMAAAAA VTGHFIDVRE LIQGSAA
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