| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1544 |
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| Symbol | |
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| ID | 6110485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 1701983 |
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| End bp | 1702954 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641621331 |
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| Product | dihydrouridine synthase DuS |
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| Protein accession | YP_001748418 |
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| Protein GI | 170720730 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.177604 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAATTG CCCTGGCCCC TATGGAGGGG CTGGTCGACA ACATCCTGCG CGACGTTCTG
ACCCGAGTGG GCGGCATCGA TTGGTGCGTC ACCGAGTTCA TCCGCGTGTG CGACCGCCTG
TTGCCTGCTT CTTCCTTCGA CAAGCTCGCG CCTGAACTGC GTAAGGGTGC GCGCACGGCT
GCCGGTGTAC CCATGCGTGT GCAGTTGCTG GGCTCGGATC CCGTCTGCCT GGCCGAAAAC
GCGGCCCTGG CCTGTGAGCT GGGTGCGCCG GTGATTGACC TTAATTTCGG TTGCCCGGCC
AAGACCGTGA ACAAGTCACG CGGCGGCGCA GTGCTGCTCA AGGAGCCCGA ACTGCTGCAC
GCCATCGTGC GTGAAGTTCG GCGTGCAGTG CCGGCGCACA TCCCGGTCAC CTCCAAGATG
CGTCTTGGCT TCGACACTCC GGACGGTGCG CTCGATTGTG CTACCGCGCT GGCTGAGGGC
GGCTCGGCGC ACCTGGTGGT ACATGCGCGC ACCAAAGTCG AGGGCTATAA GCCGCCTGCA
CACTGGGAGT GGGTGGCGCG GGTTCAGGAT GTGGTCAAGG TGCCGGTGTT CGCCAACGGT
GAGATCTGGA CCGTAGACGA CTGGCGGCGT TGCCGCGAGG TCAGCGGCGC AGAGGACATC
ATGCTCGGGC GGGGGCTGGT GTCGCGGCCG GACCTGGCCT TGCAGATTGC GGCTGCGCGA
GACGGGCGTG AGTACCAGCC GATGAGTTGG GAGGCGTTGT TGCCCTTGCT GCGCGAGTTC
TGGCGCCAGG CCCAAGCCAA GCTGTCGCCG CGCTATGCAC CGGGGCGGAT GAAACAGTGG
TTGGCGATGC TGACGCGTAG TTATCCCGAG GCGGTACTGC TGTTTGCCGA GCTGCGCAGG
GAAGATGACT GTCAGCGGAT CAGCCGGTTG CTGGGTGTTG AGGTGCAGGC ATCCGAAGAG
TGTGTCGCGT GA
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| Protein sequence | MQIALAPMEG LVDNILRDVL TRVGGIDWCV TEFIRVCDRL LPASSFDKLA PELRKGARTA
AGVPMRVQLL GSDPVCLAEN AALACELGAP VIDLNFGCPA KTVNKSRGGA VLLKEPELLH
AIVREVRRAV PAHIPVTSKM RLGFDTPDGA LDCATALAEG GSAHLVVHAR TKVEGYKPPA
HWEWVARVQD VVKVPVFANG EIWTVDDWRR CREVSGAEDI MLGRGLVSRP DLALQIAAAR
DGREYQPMSW EALLPLLREF WRQAQAKLSP RYAPGRMKQW LAMLTRSYPE AVLLFAELRR
EDDCQRISRL LGVEVQASEE CVA
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