| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1539 |
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| Symbol | |
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| ID | 6110474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 1695271 |
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| End bp | 1697286 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641621320 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_001748413 |
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| Protein GI | 170720725 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.455329 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAGT TCCAGCTCGT CACCCGTTTT CAGCCGGCCG GCGATCAGCC CGAGGCCATC
CGCCAGATGG TCGAGGGCAT CGAGGCGGGC CTGTCGCACC AGACCCTGCT GGGTGTAACC
GGTTCGGGCA AGACCTTCAG CATTGCCAAC GTCATTGCGC AGGTGCAGCG CCCGACCCTG
GTGCTGGCGC CCAACAAGAC CCTCGCCGCG CAGTTGTATG GCGAGTTCAA GGCGTTCTTT
CCGAACAACG CCGTCGAGTA TTTCGTTTCC TATTACGACT ATTACCAGCC TGAAGCCTAC
GTGCCTTCCT CGGACACCTT CATCGAGAAG GACGCTTCGA TCAACGATCA TATCGAGCAG
ATGCGCCTGT CTGCGACCAA GGCGCTGCTG GAGCGTCGCG ATGCGATCAT CGTCACCACG
GTTTCGTGCA TCTACGGCCT GGGTAGCCCC GAGACCTACC TGAAGATGGT CCTGCACGTC
GATCGCGGCG ACAAGCTTGA CCAGCGCGCG CTGTTACGCC GCCTCGCCGA TTTGCAGTAC
ACGCGCAACG AGATGGACTT TGCCCGCGCC ACCTTCCGCG TGCGTGGCGA CGTCATCGAT
ATCTTCCCGG CCGAATCGGA CCTTGAAGCC ATCCGCATCG AGCTGTTCGA CGACGAGGTG
GAGAACATCG CTGCGTTCGA CCCGCTCACT GGGGAAGTCT TTCGCAAGTT GCCGCGCTTC
ACCTTCTACC CCAAGAGCCA TTACGTCACC CCTCGGGAAA CCCTGTTGGA GGCGGTGGAG
GGGATCAAGG ACGAACTCAA GGAGCGCCTC GAGTACCTGC ACAAGGCCAA CAAGCTGGTC
GAGGCTCAGC GCCTGGAGCA GCGTACCCGT TTCGACCTGG AGATGATTCT CGAGTTGGGT
TACTGCAATG GCATCGAGAA CTACTCGCGC TACCTGTCCG GACGCCCGGC GGGTGCACCG
CCGCCCACCC TCTACGACTA CCTGCCGGAC GATGCGCTGC TGGTGATCGA CGAATCCCAC
GTCAGCGTTC CGCAGGTCGG GGCAATGTAC AAGGGCGACC GCTCGCGCAA GGAAACGCTG
GTCGAGTACG GCTTTCGCCT GCCTTCGGCC CTGGACAACC GGCCAATGCG CTTCGATGAG
TGGGAGTCTG TCAGCCCGCA GACCATCTTT GTCTCGGCAA CGCCCGGGCC TTACGAGGCC
GAGCACGCCG GGCGCGTGGT CGAGCAGGTG GTGCGTCCGA CCGGGTTGGT CGACCCGCAG
GTCGAGGTGC GTCCGGCGCT GACCCAGGTC GACGACCTGC TGTCGGAAAT CCGCAAGCGC
GTGGAGCAGG GCGAGCGGGT TCTGGCCACC ACGTTGACCA AGCGCATGGC TGAGGATCTC
TCCGACTACC TGGCCGATCA CGATGTGCGG GTGCGCTACC TGCACTCGGA CATCGACACC
GTGGAACGGG TCGAAATCAT CCGTGACCTG CGCCTGGGCA CTTTTGATGT ATTGGTGGGC
ATCAACCTGC TGCGCGAGGG TCTGGACATG CCCGAGGTGT CACTGGTGGC GATCCTGGAC
GCCGACAAGG AAGGGTTCCT GCGCTCCGAG CGCTCGCTCA TCCAGACCAT CGGGCGTGCC
GCGCGTAACC TCAATGGCCG CGCGATTCTG TATGCCGATC AGATAACCGG CTCCATGCAG
CGTGCCATCG ATGAAACCGA GCGCCGCCGC GAGAAACAGA TCGCCTTCAA CCAAGCTAAT
GGCATCGTGC CCAAGGGGGT GGTCAAGGAC ATCACCGATA TCATGGAAGG CGCCACCGTG
CCGGGGTCGC GCAGCAAGAA GCGCAAGGGC ATGGCCAAGG CCGCCGAGGA GAGCGCCCGT
TACGAGGCCG AACTGCGCAC GCCGGGCGAG ATCACCAAGC GCATCAAGCA ACTGGAAGAG
AAAATGATGC AGTTTGCCCG CGACCTGGAA TTCGAGGCGG CGGCGCAGTT GCGTGACGAG
ATTACCAAGC TGCGCGAGCG GTTGATTACC AGTTGA
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| Protein sequence | MSEFQLVTRF QPAGDQPEAI RQMVEGIEAG LSHQTLLGVT GSGKTFSIAN VIAQVQRPTL
VLAPNKTLAA QLYGEFKAFF PNNAVEYFVS YYDYYQPEAY VPSSDTFIEK DASINDHIEQ
MRLSATKALL ERRDAIIVTT VSCIYGLGSP ETYLKMVLHV DRGDKLDQRA LLRRLADLQY
TRNEMDFARA TFRVRGDVID IFPAESDLEA IRIELFDDEV ENIAAFDPLT GEVFRKLPRF
TFYPKSHYVT PRETLLEAVE GIKDELKERL EYLHKANKLV EAQRLEQRTR FDLEMILELG
YCNGIENYSR YLSGRPAGAP PPTLYDYLPD DALLVIDESH VSVPQVGAMY KGDRSRKETL
VEYGFRLPSA LDNRPMRFDE WESVSPQTIF VSATPGPYEA EHAGRVVEQV VRPTGLVDPQ
VEVRPALTQV DDLLSEIRKR VEQGERVLAT TLTKRMAEDL SDYLADHDVR VRYLHSDIDT
VERVEIIRDL RLGTFDVLVG INLLREGLDM PEVSLVAILD ADKEGFLRSE RSLIQTIGRA
ARNLNGRAIL YADQITGSMQ RAIDETERRR EKQIAFNQAN GIVPKGVVKD ITDIMEGATV
PGSRSKKRKG MAKAAEESAR YEAELRTPGE ITKRIKQLEE KMMQFARDLE FEAAAQLRDE
ITKLRERLIT S
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