Gene PputW619_1519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_1519 
Symbol 
ID6110453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp1677517 
End bp1678542 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content60% 
IMG OID641621299 
Productsignal peptide peptidase SppA, 36K type 
Protein accessionYP_001748393 
Protein GI170720705 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0616] Periplasmic serine proteases (ClpP class) 
TIGRFAM ID[TIGR00706] signal peptide peptidase SppA, 36K type 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0791884 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGATG AGTGGAAAGC ACCCGGTTCC GAGGCTGAAG AAGAGCGCCT TACGCGCGAA 
GACCGTCAAG AGGATGAGCG TGTAGAACGC AAAAGCTGGA AGCTGCTGGA GAAGACCCTG
CTGGCCGGTG TCCAGGAGCA GCGCAGGGCG CGTCGCTGGG GGATCTTCTT CAAGTTGCTG
ACCTTCGTCT ATCTCTTCGG TGTATTGGCC CTGTTCCTGC CTTGGACGGA TATGGACAAG
GCCGCTTCAC GCAGCGCCAG CCATACCGCA TTGGTGGAGG TGCGTGGTGT GATCGCCGAT
CAGGAAGCTG CCAGTGCCGA CAACCTCGTC AAGAGTCTGC GCGAGGCCTT CAAGGATCCA
AAGACCAAGG CCGTGGTCAT GCGTATCAAT AGCCCGGGAG GCAGTCCGGT ACAGGCAGGT
TATGTCTATG ACGAGATCCG CCGCCTGCGC GGTGAGTATC CGGACATCAA GCTGTACGCG
GTAATCGCTG ACCTGGGTGC ATCGGGTGCC TATTACATTG CCAGTGCGGC GGACGAGATC
TATGCCGACA AGGCCAGCCT GGTGGGTTCC ATTGGTGTGA CGGCGGCCGG GTATGGTTTT
GTGGGGTCGA TGGAGAAGCT TGGTGTCGAA CGGCGCACGT ATACCGCCGG TGAGCACAAG
GCCTTCCTGG ATCCGTTCTC GCCGGAAAAG CCTGAAGAGC GGGCGTTCTG GCAGGGCGTG
CTGAATACCA CCCATCAGCA GTTCATTGCC ATGGTCAAGC AGGGTAGGGG TGATCGCTTG
AAAGACAAGG AGCATCCTGA GTTGTTCAGC GGCCTGGTGT GGTCGGGTGA GCAGGCCAAG
GCGCTTGGGC TTGTCGATGG CCTGGGCAGT GCGAGCTATG TGGCGCGTGA GATCGTGGGG
GAGAAGGACC TGGTCGATTT CACGGTCGAG GAGTCACCGT TCGATCGCTT CTCCAAGCGC
ATCGGTGCCA GCGTGGCGGA AAAGTTGGCC ATGTACATGG GCTTCCAGGG GCCTGCCTTG
CGCTGA
 
Protein sequence
MVDEWKAPGS EAEEERLTRE DRQEDERVER KSWKLLEKTL LAGVQEQRRA RRWGIFFKLL 
TFVYLFGVLA LFLPWTDMDK AASRSASHTA LVEVRGVIAD QEAASADNLV KSLREAFKDP
KTKAVVMRIN SPGGSPVQAG YVYDEIRRLR GEYPDIKLYA VIADLGASGA YYIASAADEI
YADKASLVGS IGVTAAGYGF VGSMEKLGVE RRTYTAGEHK AFLDPFSPEK PEERAFWQGV
LNTTHQQFIA MVKQGRGDRL KDKEHPELFS GLVWSGEQAK ALGLVDGLGS ASYVAREIVG
EKDLVDFTVE ESPFDRFSKR IGASVAEKLA MYMGFQGPAL R