| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1517 |
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| Symbol | |
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| ID | 6110451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 1675829 |
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| End bp | 1676830 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641621297 |
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| Product | RluA family pseudouridine synthase |
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| Protein accession | YP_001748391 |
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| Protein GI | 170720703 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000147946 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAAGT GCTTCAATTC CATAAAAAAT TGTTATGATC CCTTGATGAC GACCAATACC
CCTCCGACTT CCGGCGTTCA GCTGATCGAA GTCGCGCCGG AGCTTGCCGG CCAACGCATC
GACAATTTCC TCATCACGGC GCTCAAGGGT GTACCCAGGA CGCTGGTCTA CCGCATCCTG
CGCAAAGGCG AGGTCCGGGT CAACAAGGGC CGTGTCAAGC CTGAGTACAA GATCCAGGCG
GGTGACATCG TCCGTGTACC GCCTGTGCGC CTCCCGGAGC GTGACGAGCC GGCCCCGGTT
GCCCAGGGGC TGCTGCAGCG CCTGGAAGCC GCCATCGTCT ACGAAGACAA GGCGCTGATC
GTGATGAACA AGCCGGCCGG TATCGCCGTG CATGGTGGCA GTGGCCTGAG CTTTGGTGTG
ATCGAGGCGC TGCGCCAGTT GCGTCCGGAT GCCAAGGAGC TGGAGCTTGT GCACCGCCTG
GATCGCGACA CTTCGGGCCT GCTGATGATT GCCAAGAAGC GCAGCATGCT GCGCCATCTG
CATGCCGCGC TGCGTGGCGA TGGGGTCGAC AAGCGCTACA TGGCGCTGGT GCGTGGCCAC
TGGCCTACCT CGAAGAAGCA GGTCAATGCC CCGTTGCTCA AGAGCAACCT GCGTTCGGGC
GAGCGTATGG TCGAGGTGAA TGACGAGGGC AAGGAAGCGC TGACCCTGTT CCGTGTGCTT
CGCCGTTTCG GTGAGTTCGC CACCATTGTC GAGGCGCGCC CTATCACTGG GCGTACCCAT
CAGATTCGCG TACATACTCT GCATGCTGGC CATATGATCG CCGGTGACAG CAAATACGGC
GACGAAGATT TCAGTCGCGA GATTCGAGAC TTGGGAGGCA AGCGCCTGTT CCTGCATGCC
TATGCCCTCA CGGTGCCGCT GCCTGATGGT GGTGAGCTCA AGCTCGAGGC GCCTGTGGAC
GAAGTTTGGG CGAAAACCGT GGAGCGTCTG GGGGCGTCCT GA
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| Protein sequence | MIKCFNSIKN CYDPLMTTNT PPTSGVQLIE VAPELAGQRI DNFLITALKG VPRTLVYRIL
RKGEVRVNKG RVKPEYKIQA GDIVRVPPVR LPERDEPAPV AQGLLQRLEA AIVYEDKALI
VMNKPAGIAV HGGSGLSFGV IEALRQLRPD AKELELVHRL DRDTSGLLMI AKKRSMLRHL
HAALRGDGVD KRYMALVRGH WPTSKKQVNA PLLKSNLRSG ERMVEVNDEG KEALTLFRVL
RRFGEFATIV EARPITGRTH QIRVHTLHAG HMIAGDSKYG DEDFSREIRD LGGKRLFLHA
YALTVPLPDG GELKLEAPVD EVWAKTVERL GAS
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