| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1489 |
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| Symbol | |
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| ID | 6110423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 1629107 |
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| End bp | 1631296 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641621269 |
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| Product | outer membrane autotransporter |
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| Protein accession | YP_001748363 |
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| Protein GI | 170720675 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3468] Type V secretory pathway, adhesin AidA |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain
[TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAGCT TCAGCCCCGT TACATTACGG CATGTATTGC ACGTCGCTTC GTTGGCGCCA
CTGTTGTTGC TCACCCCGCA AGCCATGGCA CAGACCATTC GCGATGACAC CCTCATCGAC
GGCAGTACGG CGCTCGACAA TTACACTGTA ACCAACGCTG CCACCCTCAC GGCCAATGGT
GCCGTCACCC GCGACATCCT GGTAAACGCA GGTGCCAGCG TAGTGCTCAA TGCCACCCAG
GTAACTGCAA CCGGCAGAAC GCCCGGGGTA CGCGTCACCA GCGGCACAGC CAGCATCAGC
AACAGCCAGA TCACCGCCGA ATCGACTGGC TTGAACGCTG CCATTGACCT GACCGACCTC
AGGCCTTCAC AGGCCGATGT GACCAACAGC ACAATCACTG GCGGCACATT CGGCGCGCAG
ATCAACAGCA GCACAGTCAC CCTGGTGAAC AGCACGCTGG TGGGCGCCAA TGCCGACGCC
ATCGGCGCGC AACTTTTCGA CGGTAACTTG CACGCCAGTG CCGGCAGCCG AGTTGTCGGC
GGGCAGAATG GTGTAAGCCT TCGCGGCGAC AGTGGCCAGC CAGCCAAGGG CAATACACTG
GTGCTCGATG CCAGCCATGT CGAAGGCATC AACGGCTCCG CCATCGCCGT CGGCACCGTC
GGTGGCACAC CAGCCACTGC AACGATCCAG GTACTCAATG GTTCAACCCT GAAGGGCGGC
AACGGTACAT TGGTGGAAGT CGGTAGCCTT GGCATCGCCG ATATCACGGT TTCTGACAGC
CACCTGGAAG GTGACATCAT CGTCGCCGAT GGCGGCTCGG CCAACCTTAC CCTGGCCAAC
CAGGCCACCC TCAAAGGCCG CCTGGAAAAC CTCGACCGCC TGGCCCTGAA CAGCGAAGGG
CAGTGGACCA TGACCGGCGA CGCCCAGCTC AACGACCTGT CGATGGACGG CGGCTCGGTA
CAGTTTGGCG ACAATGGCGA GTTCTACACC TTGCAGGTGG CCAACCTGGA AGGCAACGGC
ACGTTCATCA TGAACGTCGA CTTTGCCGAC GGTAAAAGCG ACCTGCTCGA AGTGACCGGT
AACGCCACCG GTGATCATCA GATCCTGGTG AGCAGCACCG GCAAAGACCC ACTGGCCGAT
ACCGAACTGC ACATGGTGCA TACCGACGCC GGCGATGCGA ACTTCTCGCT GGTGGGCGGG
GCGGTAGACC TGGGTACCTT TGCCTATGGC CTGGTGCAAC GCGGCAACGA CTGGTATCTG
GATGCCTCGA CCCGCTCGCT CAGCAACGGC ACCAAAACCA TCCTGGCCCT GGCCAACACC
GCCCCTACTG TCTGGTATGG CGAGCTCACC ACCCTGCGCA GCCGCATGGG TGAAGTACGC
CGTAACGATG GCGCCGCCGG CGGTTGGGTT CGCAGCTACG GCAACCAGTA CAACGCCTCT
GCTTCGGGCT TTGGCTACAA ACAGCGGCAA CAGGGCATGT CGTTCGGTGC CGATGGCCGC
CTGCCGGTCG GCGACGGCAA CTGGCTGGCC GGCGTGACTG CAGGCTACAG CAACTCCGAC
CTCAACCTGC AAGGCGGCAG CACCGGCAAG GTCGACAGCT TCCACCTGGG TGCCTATGCC
ACCTGGCTCG ACCCGCAGAG CGGCTACTAC TTCGACGGCG TTGCCAAGCT CAACCGCTAC
CAGAACCGCG CCGAAGTGCA ACTGAGCGAC GGCACCAAGA CCAAGGGCGA CTACAGCAAC
CACGGGGTTG GCCTGTCGCT TGAAGCGGGC CGGCACCTAA AGCTGGGCGA TGGCTACTTT
GTCGAGCCTT ATGCACAGCT GGCAGCCATG ACCATCAAAG GCCAGTCCTA CCACCTGGAC
AACGGGCTGC GCGCCAGCGG CGACGACACC CACTCGCTGC AGGGCAAGCT GGGCACAACC
GCCGGCCGCA CGTTCGATTA CGGCGAAGGG CGCATGGTTC AGCCCTACCT GCGAGCTGCC
GTCGCCCACG AGTTCGTCAA CGGCAACCAG GTGCGGGTCA ATGGCAACAG CTTCCACAAC
GACCTGGCCG GTACCCGCGC CGAGCTGGGC GCTGGCGTCG TCGCAGCCTG GTCGCAGCAA
TGGCAGGCAC ATGCCGAATT CGACTACGCC AACGGCGAAC GCCTCGAACA ACCCTGGGGG
GTGAGCGTGG GCCTCCGTTA CAACTGGTGA
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| Protein sequence | MPSFSPVTLR HVLHVASLAP LLLLTPQAMA QTIRDDTLID GSTALDNYTV TNAATLTANG
AVTRDILVNA GASVVLNATQ VTATGRTPGV RVTSGTASIS NSQITAESTG LNAAIDLTDL
RPSQADVTNS TITGGTFGAQ INSSTVTLVN STLVGANADA IGAQLFDGNL HASAGSRVVG
GQNGVSLRGD SGQPAKGNTL VLDASHVEGI NGSAIAVGTV GGTPATATIQ VLNGSTLKGG
NGTLVEVGSL GIADITVSDS HLEGDIIVAD GGSANLTLAN QATLKGRLEN LDRLALNSEG
QWTMTGDAQL NDLSMDGGSV QFGDNGEFYT LQVANLEGNG TFIMNVDFAD GKSDLLEVTG
NATGDHQILV SSTGKDPLAD TELHMVHTDA GDANFSLVGG AVDLGTFAYG LVQRGNDWYL
DASTRSLSNG TKTILALANT APTVWYGELT TLRSRMGEVR RNDGAAGGWV RSYGNQYNAS
ASGFGYKQRQ QGMSFGADGR LPVGDGNWLA GVTAGYSNSD LNLQGGSTGK VDSFHLGAYA
TWLDPQSGYY FDGVAKLNRY QNRAEVQLSD GTKTKGDYSN HGVGLSLEAG RHLKLGDGYF
VEPYAQLAAM TIKGQSYHLD NGLRASGDDT HSLQGKLGTT AGRTFDYGEG RMVQPYLRAA
VAHEFVNGNQ VRVNGNSFHN DLAGTRAELG AGVVAAWSQQ WQAHAEFDYA NGERLEQPWG
VSVGLRYNW
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