| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1481 |
|---|
| Symbol | |
|---|
| ID | 6110410 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 1619706 |
|---|
| End bp | 1620917 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641621256 |
|---|
| Product | aminotransferase AlaT |
|---|
| Protein accession | YP_001748355 |
|---|
| Protein GI | 170720667 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGTTCA GCAAATCGAA CAAGCTCGCC AATGTCTGCT ACGACATTCG CGGCCCGGTG
CTCAAGCACG CCAAACGCCT GGAAGAGGAA GGCCACCGCA TCCTCAAGCT GAACATCGGC
AACCCGGCGC CGTTTGGCTT CGAAGCGCCG GACGAAATCC TCCAGGATGT GATCCGCAAC
CTGCCCACTG CCCAGGGCTA CAGCGACTCC AAAGGCCTGT TCAGCGCGCG CAAGGCGGTG
ATGCAGTACT GCCAGCAGAA GGAAATCGAG GGTGTCACCA TCGAGGACAT CTACCTGGGC
AATGGTGTTT CCGAGCTGAT CGTCATGTCG ATGCAGGCAC TGCTCAACAA CGGCGACGAA
GTGCTGATCC CGGCCCCCGA CTACCCGCTA TGGACCGCTG CGGTGAGCCT GGCAGGCGGC
AAGCCGGTGC ATTACCTGTG CGACGAACAG GCCGACTGGT TCCCTGACCT TGAAGACATC
AAGGCCAAGA TCACCCCGAA CACCAAGGCC CTGGTCATCA TCAACCCGAA CAACCCGACC
GGCGCCGTCT ATTCCAAAGA GTTGCTGCTG GGCATGCTGG AGCTGGCACG CCAGCACAAC
CTGGTGGTGT TCTCCGACGA GATCTACGAC AAGATCCTCT ATGACGAGGC CGTGCACATC
AGCACCGCGT CACTGGCCCC GGACCTGCTG TGCCTGACCT TCAACGGCCT GTCCAAGTCG
TACCGGGTGG CGGGCTTCCG CTCCGGCTGG CTGATCATCT CCGGGCCCAA GCACCACGCC
CAGAGCTACA TCGAAGGCAT CGACATGCTG GCCAACATGC GCCTGTGCGC CAACGTACCG
GCCCAGCACG CCATCCAGAC TGCGCTGGGC GGTTATCAGA GCATCAATGA CCTGGTGCTG
CCCCCTGGCC GGCTGCTGGA GCAGCGCAAC CGCACCTATG AGCTGCTCAA TGACATCCCG
GGGGTTAGCT GCGTCAAGCC GATGGGTGCG CTGTATGCCT TCCCGCGGAT CGACCCTAAA
GTCTGCCCGA TCCTCAACGA CGAGAAGTTC GCGCTCGACC TGCTGCTGTC TGAGAAGCTG
CTGATCGTCC AGGGCACGGC GTTCAACTGG CCTTGGCCGG ACCACTTCCG TGTGGTGACC
TTGCCACGGG TGGATGACCT GGAGGCTGCG ATTGGCCGGA TTGGCAACTT CCTGCGCACG
TATTCGCAGT AA
|
|---|
| Protein sequence | MQFSKSNKLA NVCYDIRGPV LKHAKRLEEE GHRILKLNIG NPAPFGFEAP DEILQDVIRN
LPTAQGYSDS KGLFSARKAV MQYCQQKEIE GVTIEDIYLG NGVSELIVMS MQALLNNGDE
VLIPAPDYPL WTAAVSLAGG KPVHYLCDEQ ADWFPDLEDI KAKITPNTKA LVIINPNNPT
GAVYSKELLL GMLELARQHN LVVFSDEIYD KILYDEAVHI STASLAPDLL CLTFNGLSKS
YRVAGFRSGW LIISGPKHHA QSYIEGIDML ANMRLCANVP AQHAIQTALG GYQSINDLVL
PPGRLLEQRN RTYELLNDIP GVSCVKPMGA LYAFPRIDPK VCPILNDEKF ALDLLLSEKL
LIVQGTAFNW PWPDHFRVVT LPRVDDLEAA IGRIGNFLRT YSQ
|
|---|
| |