| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1478 |
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| Symbol | |
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| ID | 6110407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 1616866 |
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| End bp | 1617633 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641621253 |
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| Product | extradiol ring-cleavage dioxygenase class III protein subunit B |
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| Protein accession | YP_001748352 |
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| Protein GI | 170720664 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3384] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.637793 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCCCA GCCTGTTCAT TTCCCACGGC TCCCCCATGC TCGCCCTGCA ACCCGGCGCC
AGCGGGCCGG CGCTGGCCCG GCTGGCCAAT GCCCTGCCAC GCCCGAAGGC GATAGTGGTG
GTCTCAGCGC ACTGGGAAAG CCAAGAGCTG CTGGTGACCG GCAACCCGCA CCCCGAAACC
TGGCATGACT TCTACGGCTT TCCTGCAGCG CTGTACGCCG TTCAGTACCC TGCGCCTGGC
CATGCGCAAC TGGCCGCGAA CGTCAGCGAG CGGCTGAACG CCGCCGGCCT GCCAGCTCGC
CTGGATGCCC AGCGGCCATT CGACCATGGG GCCTGGGTGC CGATGTCGTT GATGTATCCC
GATGCAAGCA TTGCGCTGAT TCAGGTGTCG CTCCCTAGCC ACATGGGGCC GGCGCTGCAA
ATCAAGGTCG GCCAGGCATT GGCCGGGCTG CGCAGCGAAG GGGTATTGCT GGTGGGGTCC
GGGAGCATCA CCCATAACCT GGGCGAACTG GACTGGCATG CCGGGCCGGA CGTGATCGAG
CCTTGGGCAC TGGCGTTTCG TGACTGGGTG GTGGAGAAGC TGGGCGAGGA CGACCAGGCC
GCGCTGCTGG ACTTCAAGCA ACAAGCGCCG TTTGCGTTGC GTAACCACCC CAGTGATGAG
CATTTCTTGC CGTTGTTCTT TGCCCTTGGG GCCGGGGGCA GATTTGGCAT TGTGCACCAA
GGCTTTACCC TAGGGGCGCT GGGTATGGAC ATCTATCGCT TCGACTGA
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| Protein sequence | MLPSLFISHG SPMLALQPGA SGPALARLAN ALPRPKAIVV VSAHWESQEL LVTGNPHPET
WHDFYGFPAA LYAVQYPAPG HAQLAANVSE RLNAAGLPAR LDAQRPFDHG AWVPMSLMYP
DASIALIQVS LPSHMGPALQ IKVGQALAGL RSEGVLLVGS GSITHNLGEL DWHAGPDVIE
PWALAFRDWV VEKLGEDDQA ALLDFKQQAP FALRNHPSDE HFLPLFFALG AGGRFGIVHQ
GFTLGALGMD IYRFD
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