| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1456 |
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| Symbol | |
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| ID | 6110385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 1594562 |
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| End bp | 1595788 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641621231 |
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| Product | outer membrane porin |
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| Protein accession | YP_001748330 |
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| Protein GI | 170720642 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.126802 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTCCA AACTGCGCTA CGCCGTAACG CTGGCGGGGA TGACGTGTGT CACACCCCTG
CTGGCCGCCA GCTTTATCGA AGACAGCAAG GTACGCCTGG ATATCCGCAA CTTCTATTAC
AACGCAGACT TTCGCGACGG TACGGGTGTA TCAAAGCGGG AAGAATGGGC ACAGGGATTT
CTGCTCAACT ATGAATCTGG ATTTACCCAA GGAGATATCG GCGTTGGCCT GGATGCACTG
GGCTATCTCG GCGTCCGTCT CGACTCCAGT GCAGATCGGA CGGGAAGCGG GCTTCTGCCA
ACTACTGCAT CGGGAGAGGC GGTTGAAGAG TACTCCAAGG GCGGTTTAGC AGCGAAAGTC
AAAGTGTCGA GGACTGAACT GCGCTACGGC ATCGCGCTCC CCAAGGTACC GGTTTTGCAA
TTCAATGGTA GCCGGCTTTT CCCGCAGTCC TTCCAAGGGA CGCAGATCAG TTCCAGCGAA
ATTGACGGGC TGACCGTCAA CATGGCGCAA TTCAACCGCA CAACCAGCCC CGACTCCACC
GACCAACAAC ACATCATGCT GGCGGCAAAA AACGGCCGTT ACTCAACCGC CGGCGTTGGT
AATCACTTCC GGTACGCTGG CGCGAGCTAC AAGCCCGACC CAACACTGAC GCTCAGCTAC
TACCACGGTG GCCTCGAGGA CGTTTACGCG CAGCACTTTC TCGGCGCGAC CCAGCGCCGA
AAGCTTGGCC GTGGGTGGCT CGAGTTGGAC CTGCGGGCTT TCTTCAGCCA TGAAGCAGGC
AATGCCAAGG CCGGTCGTGT TGACAACGAG GCTTACTCCG CCCTGGTCAG TTACACACTC
GACAATGGCC ACAGCATGCT TGCCACCTAT CAGCATATGG AAGGTGACAC CGGCTTCCCC
TACATCAATA ACCCGTATTT GCCCAACTAC GTTCAATACC ACGACTTCGC AGAAGCAGGT
GAGCGCAGTT GGCAGTTTCG CTACGGCTAT GACTTCAGTC ACCTGGGTGT GCACGGGTTG
AGCTTTTATA CCAGCTATAC CCAGGGGACA CATCTGGACA AGCGAGGCGG CGGCGGCGAG
TGGGAGCGCG ACGTGGATGT GACCTACGAG ATTCCACACT TCAAAGGCTT TTCGATTCGC
TGGCGTAACG CCCTTTACCG AAGCGATATC AACCGTGGCA TCGACGAGAA CCGCTTGATC
CTCAACTACT CGCTTGCATT CAAGTAA
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| Protein sequence | MNSKLRYAVT LAGMTCVTPL LAASFIEDSK VRLDIRNFYY NADFRDGTGV SKREEWAQGF
LLNYESGFTQ GDIGVGLDAL GYLGVRLDSS ADRTGSGLLP TTASGEAVEE YSKGGLAAKV
KVSRTELRYG IALPKVPVLQ FNGSRLFPQS FQGTQISSSE IDGLTVNMAQ FNRTTSPDST
DQQHIMLAAK NGRYSTAGVG NHFRYAGASY KPDPTLTLSY YHGGLEDVYA QHFLGATQRR
KLGRGWLELD LRAFFSHEAG NAKAGRVDNE AYSALVSYTL DNGHSMLATY QHMEGDTGFP
YINNPYLPNY VQYHDFAEAG ERSWQFRYGY DFSHLGVHGL SFYTSYTQGT HLDKRGGGGE
WERDVDVTYE IPHFKGFSIR WRNALYRSDI NRGIDENRLI LNYSLAFK
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