| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1422 |
|---|
| Symbol | |
|---|
| ID | 6110350 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 1562054 |
|---|
| End bp | 1562896 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641621196 |
|---|
| Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
|---|
| Protein accession | YP_001748296 |
|---|
| Protein GI | 170720608 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.197973 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAGA TTACCCAGAA CATCGAATGT TCCAACGCCG CCCCGTTCGT GCTGTTCGGC
GGTATCAACG TCCTTGAGTC CGAGGACCTG GCCCTTACCG CCTGCGCCGA ATACGTGCGG
GTAACCGAGA AGCTGGGCAT TCCTTATGTG TTCAAGGCAA GCTTCGACAA GGCCAACCGT
TCCTCGATCC ACTCCTACCG TGGCCCAGGC ATGGAAGAAG GCCTGCGCAT CTTCGAGAAA
GTAAAAGCCG AGTTCGGTGT ACCGATCATC ACCGACGTGC ACGAGATCTA CCAGTGCGCC
CCAGTGGCCG AAGTGGTCGA CGTGCTGCAG CTGCCTGCCT TCCTGGCCCG CCAGACCGAC
CTGGTGGTGG CGCTGGCCAA GACTGGCAAA CCGGTGAACA TCAAGAAGCC GCAGTTCCTG
AGCCCTTCGC AGATGCAGAA CATCGTGCAG AAGTTCAAGG AAGCAGGTAA CGACCAGTTG
ATCCTGTGCG ACCGCGGCAC CTGCATGGGC TACGACAACC TGGTTGTGGA CATGCTGGGC
TTTGGTGTGA TGAAGCGCAC CTGCGATGAC CTGCCGATCA TTTTCGACGT GACCCACGCC
CTGCAGAACC GTGACCCTTC GGGTGCTGCT TCTGGTGGCC GCCGTGAGCA GGTGGTTGAC
CTGGCCCGTG CCGGCATGGG CGTTGGCCTG GCTGGCCTGT TCCTGGAAGC TCACCCGAAC
CCGGACCAGG CCAAGTGCGA CGGCCCAAGC GCCCTGCCGC TGGACAAGCT GGAGCCGTTC
CTGGCGCAGA TCAAAGCGCT GGATGACCTG GTGAAGTCGT TCCCGCCGCT GGTTATTGGT
TGA
|
|---|
| Protein sequence | MIKITQNIEC SNAAPFVLFG GINVLESEDL ALTACAEYVR VTEKLGIPYV FKASFDKANR
SSIHSYRGPG MEEGLRIFEK VKAEFGVPII TDVHEIYQCA PVAEVVDVLQ LPAFLARQTD
LVVALAKTGK PVNIKKPQFL SPSQMQNIVQ KFKEAGNDQL ILCDRGTCMG YDNLVVDMLG
FGVMKRTCDD LPIIFDVTHA LQNRDPSGAA SGGRREQVVD LARAGMGVGL AGLFLEAHPN
PDQAKCDGPS ALPLDKLEPF LAQIKALDDL VKSFPPLVIG
|
|---|
| |